Gene Information

Name : SACTE_3277 (SACTE_3277)
Accession : YP_004803683.1
Strain : Streptomyces sp. SirexAA-E
Genome accession: NC_015953
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3653187 - 3653999 bp
Length : 813 bp
Strand : +
Note : KEGG: sma:SAV_3634 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACGGACCGTCCCGCGCAGGACGCACACAGGAACGGCGCATCCCGGGAGCTGGAACCGGACGGGTGGGGGCGGATGCA
CGACGACGCGGTCCTGCTGCGCTCCGTCAGCCGACGGCACGGTACGGGCGACAGCGCCGTGACGGCCCTGGACAAGGTCT
CGCTGTCCTTTCCCCGGAGCACGTTCACCGCGGTCATGGGGCCTTCCGGTTCCGGCAAGTCGACCCTGTTGCAGTGCGCC
GCCGGACTCGACCGGCCCACCTCCGGAGCCGTCGTCGTGGGCGGCACCGATCTGACGAAGCTGAGCGAGACCCGGCTGAC
CCTGCTGCGCCGTGACCGCGTCGGCTTCGTCTTCCAGGCCTTCAACCTGCTGCCGTCGCTGACAGCCGAGCAGAACGTGG
CGCTGCCGCTGCGCCTCGCAGGCCGGCGCGTCTCCCGAGCCCGGGTGCGGGAGGTGCTCCAGCAGGTCGGGCTCGGCACA
CGGACCGGGCACCGGCCGACGGAGCTGTCCGGCGGCCAGCAGCAGCGCGTGGCCCTGGCCCGCGCCCTGATCACCCGCCC
CGAGGTGCTCTTCGCCGACGAGCCGACCGGCGCCCTCGACTCACGGACCAGCCGTGAGGTGCTCTCGCTGCTGCGCGGGA
TGGTCGACCGCGAGAACCGGACGATCATCATGGTCACGCACGACCCGGTGGCCGCCTCGTACGCCGACCGCGTGGTCTTC
CTCGTCGACGGCCGGGTCAACGGCGAGCTCGTCGGAGCGGGCGCCGACGCGATCGCGGCACGCCTGACCGGACTGGAGGC
CGTGTCGTGCTGA

Protein sequence : 
MTDRPAQDAHRNGASRELEPDGWGRMHDDAVLLRSVSRRHGTGDSAVTALDKVSLSFPRSTFTAVMGPSGSGKSTLLQCA
AGLDRPTSGAVVVGGTDLTKLSETRLTLLRRDRVGFVFQAFNLLPSLTAEQNVALPLRLAGRRVSRARVREVLQQVGLGT
RTGHRPTELSGGQQQRVALARALITRPEVLFADEPTGALDSRTSREVLSLLRGMVDRENRTIIMVTHDPVAASYADRVVF
LVDGRVNGELVGAGADAIAARLTGLEAVSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-40 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-40 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-40 46
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACTE_3277 YP_004803683.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-38 48
SACTE_3277 YP_004803683.1 ABC transporter-like protein NC_012469.1.7686878. Protein 8e-44 46
SACTE_3277 YP_004803683.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-43 46
SACTE_3277 YP_004803683.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-42 43