Gene Information

Name : SACTE_2819 (SACTE_2819)
Accession : YP_004803236.1
Strain : Streptomyces sp. SirexAA-E
Genome accession: NC_015953
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3168791 - 3171319 bp
Length : 2529 bp
Strand : -
Note : KEGG: sgr:SGR_4118 putative ATP-dependent Clp protease; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGTCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACGCCCCGGGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTCCAGCTCGGCCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGACCTGAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGGTACTCGGGAGGCAAGGAGGCCGCCACCGCCGGCGGTCCCGCCGAGGGC
ACCCCCTCGACGTCCCTGGTGCTCGACCAGTTCGGCCGGAATCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGT
CATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACCAAGAACAACCCGGTCCTCATCGGCG
AGCCCGGCGTCGGCAAGACGGCGGTCGTCGAGGGCCTGGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAG
GACAAGCACCTCTACACCCTCGACCTCGGTGCGCTGGTCGCCGGTTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAA
GAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACGCTCGTGGGTGCGGGTG
CCGCGGAAGGCGCCATCGACGCGGCTTCGATCCTGAAGCCCATGCTGGCGCGCGGCGAGCTCCAGACCATCGGTGCCACC
ACGCTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTCGAGCGCCGCTTCCAGCCGATCCAGGTCGCGGAGCC
GTCGCTGCCGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCCCACCACCGGGTCTCCATCACGGACG
AGGCGCTGGTCCAGGCCGCGACCCTGGCGGACCGCTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATC
GACGAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGCGGG
TGTCCGCCGCGACAAGGAGTCGGCGATCGACTCCCAGGACTTCGAGAAGGCGGCTTCTCTCCGTGACAAGGAGAAGCAGC
TGCTGGCGGCGAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTC
ATCGCCGAGGTCCTGGCGACCGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTCCGCAT
GGAGGACGAGCTCCACAAGCGCGTCATCGGGCAGAAGGACGCCATCAAGGCCCTGTCGCAGGCGATCCGCCGTACGCGGG
CCGGCCTGAAGGACCCGAAGCGTCCCGGTGGTTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTGTCC
AAGACGCTCGCCGAATTCCTCTTCGGCGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACAC
GGTTTCCCGGCTCTTCGGTTCGCCTCCCGGTTACGTGGGCTACGAAGAGGGCGGCCAGCTCACCGAGAAGGTGCGCCGCA
AGCCGTTCTCCGTCGTTCTCTTCGACGAGGTCGAGAAGGCCCACCCCGATATCTTCAATTCCCTGCTCCAGATTCTGGAA
GACGGTCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGGAC
CCGGGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCCAGGGCGACGTCAAGACGAACTACGAGCGGATGAAGGTCA
AGGTCAACGAAGAGCTCAAGCAGCACTTCCGGCCTGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAGCTG
ACCGAGGAAGACATCATCCAGATCGTCGACCTCATGGTCGCCAAGGTGGACGAGCGGCTCAAGGACCGGGACATGGGCAT
CGAGCTCAGTGCCGAGGCCAAGTCGCTCCTGGCGAAGAAGGGTTACGACCCCGTGATGGGCGCCCGGCCGCTGCGCCGGA
CGATCCAGCGCGAGATCGAGGACATCCTCTCCGAGAAGATCCTCTTCGGTGAGCTGCGCCCCGGTCACATCGTGGTCGTG
GGTACCGAGGGCGAGGGCGACGACAAGAAGTTCTCGTTCCGCGGCGAGGAGAAGTCGGCGCTGCCCGACGTCCCGCCGAT
CGAGCAGGCGGCAGGCGGCGCCGGCCCGAACCTGACGAAGGAAGCGTAG

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYSGGKEAATAGGPAEG
TPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLK
DKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT
TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLI
DEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGEL
IAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELS
KTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILE
DGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTNYERMKVKVNEELKQHFRPEFLNRVDDTVVFHQL
TEEDIIQIVDLMVAKVDERLKDRDMGIELSAEAKSLLAKKGYDPVMGARPLRRTIQREIEDILSEKILFGELRPGHIVVV
GTEGEGDDKKFSFRGEEKSALPDVPPIEQAAGGAGPNLTKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACTE_2819 YP_004803236.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 62
SACTE_2819 YP_004803236.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 1e-149 53