Gene Information

Name : Strvi_9425 (Strvi_9425)
Accession : YP_004800163.1
Strain :
Genome accession: NC_015951
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 186827 - 187138 bp
Length : 312 bp
Strand : +
Note : PFAM: Transposase IS3/IS911; KEGG: scb:SCAB_0831 transposase

DNA sequence :
ATGGCAGCACCCCGTAAATACCCCGATGAGCTCCGCGAGCGCGCGATCCGCGAGGTCCGCGCCACCGGTCGGCCGATCGC
CCACGTCGCGAAGGACCTGGGCATCCACAAGGAGGCCCTGCGCGGCTGGGTCCGCCAGGCCGAGGCCGACCGCGGCGAAC
GCGACGACCGGCTGACCACCGCCGAGCAGGACGAGCTCAAACAACTCCGCAAAGAAGTAGCGGAGTTGAGGCGGGCGAAC
GAGATCCTCAAAGCCGCCTCGGTGTTTTTTGCCCAGGAGATCGACCGTCCCCGGACGAGGCCGAGCAGGTGA

Protein sequence :
MAAPRKYPDELRERAIREVRATGRPIAHVAKDLGIHKEALRGWVRQAEADRGERDDRLTTAEQDELKQLRKEVAELRRAN
EILKAASVFFAQEIDRPRTRPSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2036 YP_005163477.1 hypothetical protein Not tested Not named Protein 2e-11 43
CDCE8392_1959 YP_005134490.1 hypothetical protein Not tested Not named Protein 1e-11 43
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 8e-12 42
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 8e-12 42
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 8e-12 42
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 1e-11 42
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 8e-12 42
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 1e-06 42
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-07 42
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 7e-08 41
unnamed AAF09023.1 unknown Not tested SHI-O Protein 1e-08 41
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 1e-11 41
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-08 41
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 1e-08 41
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 1e-11 41
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-08 41
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 8e-09 41
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 1e-11 41
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 1e-08 41
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 8e-09 41
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 1e-11 41
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 1e-08 41
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 1e-10 41
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 1e-10 41
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 1e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_9425 YP_004800163.1 transposase IS3/IS911 family protein VFG0643 Protein 3e-09 41
Strvi_9425 YP_004800163.1 transposase IS3/IS911 family protein VFG1603 Protein 3e-08 41