|
Name : Calla_0950 (Calla_0950) Accession : YP_004798568.1 Strain : Caldicellulosiruptor lactoaceticus 6A Genome accession: NC_015949 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 1019609 - 1020133 bp Length : 525 bp Strand : - Note : TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: cki:Calkr_1562 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW DNA sequence : ATGAGCGATAAAAGAGCAAAATGGTATGTTGTCCATACCTATGCAGGCTATGAAAATAAAGTAAAAGCTAATTTAGAAAA AATAATTGAAAATAGAAATTTGTCTGATAGAATCTTAGACATCAGGATTCCCACAGAACTTGTCACTGAAATTAAAGATG GAAAGAAGATTGTAAAGGAAAAAAAGAAATTTCCTTCGTATGTGTTAATCAAAGCTGTAATGGACAATGAGATATGGTAC ACGATAAGAAATGTCAGAGGCGTGACTGGTTTTGTGGGTCCTGAATCCAAACCCACACCTCTTACAGATGAAGAAATAGA AGCGATGGGTATCAAGGAAGAGGTTGTGGAGGTATTTGACATTGAAGTTGGTGACAATGTGAAGGTTGTATCTGGTCCGT TTACTGACTTTTATGGGCCAGTTGTTGAGATAAACAGAGAACGAAAAAAGGTAAAAGTAATGCTCAACCTATTTGGGAGA GAAACTCCTGTAGAATTTGATTACCACCAAGTAGAAAGATTATAA Protein sequence : MSDKRAKWYVVHTYAGYENKVKANLEKIIENRNLSDRILDIRIPTELVTEIKDGKKIVKEKKKFPSYVLIKAVMDNEIWY TIRNVRGVTGFVGPESKPTPLTDEEIEAMGIKEEVVEVFDIEVGDNVKVVSGPFTDFYGPVVEINRERKKVKVMLNLFGR ETPVEFDYHQVERL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 5e-27 | 46 |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 7e-28 | 43 |
