Gene Information

Name : Calla_2227 (Calla_2227)
Accession : YP_004799752.1
Strain : Caldicellulosiruptor lactoaceticus 6A
Genome accession: NC_015949
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2356183 - 2356875 bp
Length : 693 bp
Strand : +
Note : KEGG: ckn:Calkro_0274 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGATTGAGCTAAAAGATATTAGAAAAGTATACAACCTTGGAAAGGTGGAACTTGAAGTAATCAAAGGAATCTCTTTGAA
AATAGAAAAAGGAGAATATGTTGCAATTGTAGGTCCTTCTGGTTCTGGCAAATCAACACTAATGAACATCATCGGGCTTC
TTGACAAGCCTACTTCAGGAAATTATCTTCTGGATGGTCTTGAGGTGTCAACATTGAACGACATGCAGCTTGCATCGCTC
AGAAACAAAAATATAGGTTTTGTTTTTCAATCATTCAACCTACTAAGTAAACTCAATGCCCTTGAAAACGTTGAACTTCC
AATGATATACGCAAAAATTCCTCCCAAGGAAAGAAGGCAAAGGGCACTTTCTGCTTTAGAGCGTGTTGGCCTTTCAGACA
GAATTTATCACAAACCAAATGAACTCTCAGGTGGTCAGCAGCAAAGAGTAGCCATTGCCCGTGCAATTGTTATGAATCCT
TCTTTCTTGCTTGCCGATGAGCCAACTGGAAACTTAGACACAGCTTCGAGCATTGAAATAATGAAGATATTCCATGAACT
GAACAAAGCCGGTACAACCATCATAATGGTAACCCATGAACAGGACATTGCAAACCATGCAAAGAGAATCATCAGAATCA
GAGATGGAATGATAATTGAAGATGCACCGGTAAAAAATAGGATAACATACTAA

Protein sequence : 
MIELKDIRKVYNLGKVELEVIKGISLKIEKGEYVAIVGPSGSGKSTLMNIIGLLDKPTSGNYLLDGLEVSTLNDMQLASL
RNKNIGFVFQSFNLLSKLNALENVELPMIYAKIPPKERRQRALSALERVGLSDRIYHKPNELSGGQQQRVAIARAIVMNP
SFLLADEPTGNLDTASSIEIMKIFHELNKAGTTIIMVTHEQDIANHAKRIIRIRDGMIIEDAPVKNRITY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calla_2227 YP_004799752.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-61 61
Calla_2227 YP_004799752.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-51 52
Calla_2227 YP_004799752.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-41 47
Calla_2227 YP_004799752.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-36 43
Calla_2227 YP_004799752.1 ABC transporter-like protein NC_012469.1.7686946. Protein 6e-31 42