Gene Information

Name : Calla_2064 (Calla_2064)
Accession : YP_004799605.1
Strain : Caldicellulosiruptor lactoaceticus 6A
Genome accession: NC_015949
Putative virulence/resistance : Virulence
Product : bacteriocin ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 2167387 - 2169591 bp
Length : 2205 bp
Strand : -
Note : TIGRFAM: Peptidase C39, ABC-type bacteriocin transporter; PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; ABC transporter, transmembrane region; KEGG: cki:Calkr_0286 abc-type bacteriocin transporter; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAGAAGGAGATACTATTGTGTAAAGCAGCATGATATAACAGATTGTGCAGCAGCGAGTTTAGCAACAATTTGCCTGCA
GTATGGAAAAGAAGTATCAATAGCAAAGATAAGACAGATAGCAGGGACAGATAGGTTTGGCACAACAGCATATGGTGTTG
TGAAGGCAGCAGAAAAGCTTGGATTTGAAGCAAAAGCAGTAAGAAGCACAACCAAGGAGGCTATATTTGAAAAAATACCA
CTTCCGTGCATAGCGCATGTGTTAATAGATGGAAAGCTATTTCATTATGTTGTAATACATGAGATTAGTAAAGAAAAGAT
TGTGATAGCAGACCCGGGGAAAGGGATTGTGGAGCAAAAGCCTGAAGAATTTTTTAAAATATGGACAGGCATTTTGATAC
TGCTTGTGCCAAATGAGAGGTTCAAGAAGGGAAAACAAGAGGGAGTTTTGAAGAAGTTTTTTAAGCTGTTGAGTCCACAG
AAGAGCTTGATATTGAATATTTTTGCAGTGTCAATTGTATATACGTTGCTTGGGATAGGGGCAGCGTTTTATTACAAGTT
TTTGATGGATGATGTAATACCGAATCTTTTGAAGAATACTCTTCATGTTATAGCAGCAGGTGCGATATTGATTACGATAT
TTAAGGTGATATTAGGAGCGTTCAGGGTAAGACTTTTGATACATTTGAGTCAGAGATTGGACATTAAACTGATGCTGGGG
TATTATGAACATGTGATTGAGCTTCCGATGAGTTTTTTTGGTAGCAGGAAGATAGGAGAGATAATTTCGAGGTTTATGGA
CGCGTCAAAGATAAGGGATGCAGTATCAGGTGCAACTTTGACGCTTATGATAGACAGCATAATGGCAGTGGCAGGCGCAA
GTGTTTTATATTTGCAAAATTCAACGCTGTTTTTTATAGCCCTTGTGATGGTTTTGCTATATGCAGCGGTGGTGTTTGGA
TTTAACAGGGCATTGAGGGAAGCGAACAGGCAAGAGATGGAAGACAATGCAATTTTGACATCATATTTGGTAGAGTCGCT
GAATGGGATAGAGGTAGTAAAGGCATTTAATATAGAAGAGGATGTGAATTTTAAGACAGAAAGCAAGTTTGTAAAGCTAC
TAAAAGATGTGTTCAAGGTAGCGAATCTAAACAATTTGCAGAGTAACATAAGTACTGGAATAGCAGCAGTAGGGGTTATG
GTAATCCTGTGGGTAGGAGCACACAAGGTAATAAATGGGCAGATGAGCATAGGAGAGCTGTTTACGTTCAATGCACTGCT
TGCATACTTTGTAGACCCGATAAAGAACTTGATAGGATTGCAGCCGATGTTGCAGACAGCAATAGTTGCAGCCGAGAGGC
TTAATGAGATTTTAGAACTTGAGAGTGAGTTTAAAGAGGACGAAGACAAGAAGTTAGCTCCAAGTTTGAAAGGTGATATA
GAGATAGAAGATTTGAACTTCAGATACGGTACAAGACAGCTTGTGCTAAGAGATATAAATCTTAAGATAAGAAGTGGAGA
GAAGATAGCGATAGTAGGAGAGAGTGGTTCAGGGAAGACCACGTTGGCAAAGCTGCTTTTAGGATTTTATGATTATGAGA
GTGGGGAGATAATGATAAATGGTTATAACTTAAAAGATATAAGCAAGAGGCATTTGAGGGAGAAGATAGCATATATATCT
CAAGATATCTTTTTGTTCAGTGGTACGATATTTGAGAATTTGGTATTGGGCAACAGGAATTTAAAAATGGAAGATGTGAT
TGAAATAAGCAGATTAACCACACTGGATGAGTTTGTATCAAAATTTCCTTTGAGATACAATACCATGATAGAAGAGAATG
GAGCGAATTTGTCAGGAGGGCAAAAACAACTGATAGCGATAACCAGGGCGCTTTTAAAGAAGCCTGAGATAGTTATAATG
GATGAAGCAACCAGCAACCTTGACTCTGTAACCGAGCAGGCGATAGGGAAGGTTATAGAGAAGGTATGTGAGGGGATAAC
AACCATAATAATAGCGCACAGGCTATCGACCATATTAAAGTGCGACAGGGTTGTGGTAATGCATGAAGGTAGGATAGTAG
AGGCAGGAACGCATGAGGAGCTGATGAGAAAGAAAGGATATTATTATAACCTGTGGAGAGAGCAGCTGATGGGACTTGAG
CAAAAAGGGCTATGGGATTTGGTTGGGAGTGCAGCAAAGTCATGA

Protein sequence :
MRRRYYCVKQHDITDCAAASLATICLQYGKEVSIAKIRQIAGTDRFGTTAYGVVKAAEKLGFEAKAVRSTTKEAIFEKIP
LPCIAHVLIDGKLFHYVVIHEISKEKIVIADPGKGIVEQKPEEFFKIWTGILILLVPNERFKKGKQEGVLKKFFKLLSPQ
KSLILNIFAVSIVYTLLGIGAAFYYKFLMDDVIPNLLKNTLHVIAAGAILITIFKVILGAFRVRLLIHLSQRLDIKLMLG
YYEHVIELPMSFFGSRKIGEIISRFMDASKIRDAVSGATLTLMIDSIMAVAGASVLYLQNSTLFFIALVMVLLYAAVVFG
FNRALREANRQEMEDNAILTSYLVESLNGIEVVKAFNIEEDVNFKTESKFVKLLKDVFKVANLNNLQSNISTGIAAVGVM
VILWVGAHKVINGQMSIGELFTFNALLAYFVDPIKNLIGLQPMLQTAIVAAERLNEILELESEFKEDEDKKLAPSLKGDI
EIEDLNFRYGTRQLVLRDINLKIRSGEKIAIVGESGSGKTTLAKLLLGFYDYESGEIMINGYNLKDISKRHLREKIAYIS
QDIFLFSGTIFENLVLGNRNLKMEDVIEISRLTTLDEFVSKFPLRYNTMIEENGANLSGGQKQLIAITRALLKKPEIVIM
DEATSNLDSVTEQAIGKVIEKVCEGITTIIIAHRLSTILKCDRVVVMHEGRIVEAGTHEELMRKKGYYYNLWREQLMGLE
QKGLWDLVGSAAKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_1082 YP_698404.1 bacteriocin ABC transporter ATP-binding/permease Virulence Not named Protein 0.0 59
CPR_0658 YP_697985.1 lactococcin g processing and transport ATP-binding protein Virulence Not named Protein 1e-134 43