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Name : Calla_1876 (Calla_1876) Accession : YP_004799433.1 Strain : Caldicellulosiruptor lactoaceticus 6A Genome accession: NC_015949 Putative virulence/resistance : Unknown Product : protein translocase subunit secA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 1967416 - 1969962 bp Length : 2547 bp Strand : - Note : TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: cki:Calkr_0477 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; DNA/RNA helicase, C-terminal; SecA Wing/Scaffold; SEC-C motif DNA sequence : ATGTTAAAAATAATTGAAAAGCTGATAGGAAGCTACAGCGAAAGAGAGATAAAAAAAATCTTGCCAATAGTTGATAAGAT AGAATCACTTGCATCGGAATATGAGAGATTAACAGATGCAGAGCTGAGGCAAAAGACAGACATATTCAAACAGAGGTTAA AAAACGGCGAGACTTTGGACGATATCCTGCCAGAAGCGTTTGCAGCTGTGCGAGAGGCTGCTTGGCGGACTTTAAAGATG CGCCATTTCAGAGTTCAGTTAATTGGTGGAATAGTTTTGCACCAGGGCAGGATTGCAGAGATGAAAACTGGTGAAGGTAA AACCCTTGTGGCAACTCTGCCTGCGTACTTGAACGCTTTAGAGGGCAAGGGTGTTCATATAGTAACTGTTAATGACTACT TGGCAAAAAGAGACGCTGAGTGGATGGGACCTATTTACAATTTCTTGGGACTTTCTGTTGGTGTTATAGTCCATGGCCTG ACACATGAAGAGAGGAAAAAAGCTTATAGCTGTGATATTACCTATGGTACAAACAACGAGTTTGGGTTTGATTACTTGCG TGACAACATGGCAATTTACAAAGAAGAACTTGTGCAAAGAGAGCTAAACTATGCAATAATCGACGAGGTTGACTCAATCT TGATTGACGAGGCAAGAACGCCTCTTATCATCTCAGGTCCTGCTGAAAAGTCAACAGACCTTTACAAAAGAGCAGACAAT TTCGTAAGAAGACTAAAACCTCTTTATTATAACAGTGATGATGACAAGCAAATGCCTGATACAACCGGCTATGACTATAT AGTAAACGAGAAAAGACACACAGTTTCGCTCACAGAAGAGGGTATCAAGAAAGCCGAGAAATATTTTGGTGTCACAAACT TGGCTGACCCGGAAAATGCAACCCTTCACCACCACATTATCCAGGCACTAAAAGCTCACGCGCTCATGAAAAGAGACAGG GACTATGTTGTAAAAGATGGGCAGGTAATAATCGTTGATGAGTTCACAGGAAGATTGATGTACGGCCGAAGGTTTTCGGA AGGGCTTCACCAGGCCATTGAAGCAAAAGAAGGCGTGAGGATAGAAAGAGAAAGCAAAACCTTAGCAACAATTACCTTCC AGAACTATTTCAGGCTGTACAAAAAACTTGCTGGTATGACAGGTACTGCAAAGACAGAAGAGCAGGAGTTTAGAGAAATC TATAAGCTTGATGTCATAGAAATTCCTACGCACAAACCAATGATAAGAATTGACCATCCTGACAAGGTTTACAAGACGGA AAAGGCAAAGTTTGAGGCGATTGTTCAGGAGATTGTTGAGACTCACAAAAAAGGTCAGCCTGTTTTGGTTGGCACAGTGT CAATTGAGAAGTCTGAGATGCTGAGCGAGATGCTCAAAAAACATGGTATAAAACATGAGGTTTTAAACGCAAAACACCAC GAAAAAGAGGCTATGATAATTGCAAAGGCTGGTCAAAAAGGTGCTGTGACAATTGCAACCAACATGGCAGGCCGTGGAAC AGACATTGTTTTAGGCGAAGGTGTTGCTGAGCTTGGCGGGCTGAAAGTAATTGGTACAGAGAGGCATGAGAGCAGGCGAA TAGACAACCAGCTCCGAGGAAGAGCCGGCCGTCAGGGTGACCCAGGCGAGTCAAGGTTTTATGTATCGCTTGAGGACGAT TTGATGAGACTTTTCGGGTCTGAGAGGATCAAAAACCTTGTTGAGTCGCTGGGCTTGCCTGATGACCAGCCGATTGAACA CAAGCTCTTGTCTGATGCCATTGAAAAGGCGCAAAAGAGGGTTGAAGCACGAAACTTTGAGATACGAAAACATCTTTTGC AATTTGACGATGTTTTGAACAAGCAAAGAGAGATAATATACTCACAAAGGCGCAAGGTTTTAGAAGGCGAGAACTTAAGG GATTCTATCCTTGGCATGATAGATGAGCTTGTGGATTACAAGATAAAGGTGTACACAGGCGAAAGTCCTCATCCTGAAGA CTGGGATATAAAAGGTCTTTTGCAGGATTTGAAGTTTATATTCTTGGATAGTGAGCTTTCTGAGCAGGATGCAAAAAATA TGACAAAACAGGAGCTAAAAGAAAAGCTCATCTCAATTGCAAAAGAAAAATATGAGAAGAAAGAACAAGAAGTTGGCGAG CTTATGCGCGAGCTTGAAAGGGTTGTGCTTTTGCGAGTTGTTGACATGCACTGGATGGAACACATAGATGCAGTAGAACA GCTGAGAGAAGGCATATCTCTTCGCGCAATTGGCCAAAAAGACCCAATAGTTGAGTTCAGGTTCGAAGCGTTTGAGATGT TTGATGAAATGATAAAGAGAATCCAGGAGGATACAATAAAAATTATACTTCATGCAAATGTTGAAAATATGCCTCAAAGA GAAAGAGTTGTTAAAGAGATGTATGAAAATGCGCCATCAGACACACCTGTGAGAAAACCTGTTGTAAAAACACAGAAGGT TGGAAGAAACGACCCATGTCCTTGCGGGAGCGGCAAAAAATACAAAAAATGCTGCGGTGCAGTGTGA Protein sequence : MLKIIEKLIGSYSEREIKKILPIVDKIESLASEYERLTDAELRQKTDIFKQRLKNGETLDDILPEAFAAVREAAWRTLKM RHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDAEWMGPIYNFLGLSVGVIVHGL THEERKKAYSCDITYGTNNEFGFDYLRDNMAIYKEELVQRELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADN FVRRLKPLYYNSDDDKQMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALMKRDR DYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNYFRLYKKLAGMTGTAKTEEQEFREI YKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFEAIVQEIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNAKHH EKEAMIIAKAGQKGAVTIATNMAGRGTDIVLGEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDD LMRLFGSERIKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQRRKVLEGENLR DSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDLKFIFLDSELSEQDAKNMTKQELKEKLISIAKEKYEKKEQEVGE LMRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMIKRIQEDTIKIILHANVENMPQR ERVVKEMYENAPSDTPVRKPVVKTQKVGRNDPCPCGSGKKYKKCCGAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 3e-126 | 43 |
