|
Name : Calla_1828 (Calla_1828) Accession : YP_004799387.1 Strain : Caldicellulosiruptor lactoaceticus 6A Genome accession: NC_015949 Putative virulence/resistance : Resistance Product : D-alanine--D-alanine ligase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1181 EC number : - Position : 1920561 - 1921655 bp Length : 1095 bp Strand : - Note : TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: cki:Calkr_0526 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal DNA sequence : ATGACCAAGTTAAAGGTTGCTGTTTTGTTTGGAGGAGTTTCAACAGAACACGAAATCTCTATAGTTTCGGCAAAATCAAT CATGCAAAATATGGACAAGGAAAAATACGAAATAATTCCAATAGGTATAACAAAAGAAGGAAAATGGCTCTTGTACACAG GTAAAATTGAAGATTTGGATAACAAGTGGACTCAGTTTTCTATAGAATGTTTTATCTCTCCTGATAGAACCAAAAAGGCA CTTGTAAAAATAAAAGATAACGAGGCTACCTTTATCGACATTGACGTTGTGTTCCCGGTTTTGCATGGACTGAATGGTGA GGATGGGACAGTTCAGGGACTTTTAGAGTTGTCTAACATACCGTATGTGGGCTGCGGTGTTCTTTCGTCGGCTATATGCA TGGACAAAGCATTTGCTAAAAAGCTTGCACTTTTAGAAGGAATACCACAGGGTCATTTTTTGGTTGTATACAAAAACGAA TATTCAGCTAAAAAAGATTATTTTATAAGGCGAATAGAGAGTGAATTTTCGTATCCTGTTTTTGTAAAGCCTGCAAACTC AGGCTCATCTGTTGGTATTTCAAAAGCAAAAGACAGAGAAGACCTTGTTTTAGCAATACATGAGGCTTTTTTGTATGATA CAAAGATTTTGATTGAACAGGCTATCAACGCTCGTGAGATAGAATGCGCAGTTCTTGGGAATGATGAGGTATTTGTCTCT GAACCTGGAGAAATAATTCCGTCAAGAGAGTTTTATTCGTATGAGGCAAAGTATATTGATAATTCATCAGAGCTCATCAT CCCGGCAAGACTTCCAAAAGAAGTTGTTGAAGAGATAAAAGATTTGGCAGCAAGGATTTACAAAATTTTTGAGTGCTGTG GAATGGCAAGAGTGGACTTTTTTGTTGATAAAGATACGAACAAAGTGTATTTCAACGAGGTAAACACAATACCTGGCTTT ACAAGTATTTCGATGTATCCAAAACTTATGGAGTTCAGTAGCATTCCATATTCTCAGCTCATTGATAAACTAATTTCTCT TGCCATTGAGAAGAATGAGCAGAAAAAAAGCATAAAATACAGCAAAGAGGGCTGA Protein sequence : MTKLKVAVLFGGVSTEHEISIVSAKSIMQNMDKEKYEIIPIGITKEGKWLLYTGKIEDLDNKWTQFSIECFISPDRTKKA LVKIKDNEATFIDIDVVFPVLHGLNGEDGTVQGLLELSNIPYVGCGVLSSAICMDKAFAKKLALLEGIPQGHFLVVYKNE YSAKKDYFIRRIESEFSYPVFVKPANSGSSVGISKAKDREDLVLAIHEAFLYDTKILIEQAINAREIECAVLGNDEVFVS EPGEIIPSREFYSYEAKYIDNSSELIIPARLPKEVVEEIKDLAARIYKIFECCGMARVDFFVDKDTNKVYFNEVNTIPGF TSISMYPKLMEFSSIPYSQLIDKLISLAIEKNEQKKSIKYSKEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanB | NP_815951.1 | D-alanine--D-lactate ligase | Not tested | Not named | Protein | 2e-59 | 44 |
| vanB | YP_008394259.1 | Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase | Not tested | Not named | Protein | 2e-58 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | U00456.gene.p01 | Protein | 1e-59 | 44 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | U35369.1.gene6.p01 | Protein | 1e-59 | 44 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | AE016830.1.gene2250. | Protein | 1e-59 | 44 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | NC_005054.2598280.p0 | Protein | 3e-60 | 43 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | NC_014475.1.orf3.gen | Protein | 3e-60 | 43 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | AF130997.1.orf4.gene | Protein | 1e-57 | 43 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | AF277571.gene.p01 | Protein | 8e-58 | 43 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | AF310956.2.orf5.gene | Protein | 2e-59 | 43 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | AY489045.gene.p01 | Protein | 2e-55 | 43 |
| Calla_1828 | YP_004799387.1 | D-alanine--D-alanine ligase | AY145441.gene.p01 | Protein | 2e-59 | 43 |
