Gene Information

Name : Calla_1542 (Calla_1542)
Accession : YP_004799127.1
Strain : Caldicellulosiruptor lactoaceticus 6A
Genome accession: NC_015949
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1608902 - 1609792 bp
Length : 891 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: cki:Calkr_0791 pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; Indole-3-glycerol phosphate synthase

DNA sequence :
ATGAGCGAGGTTGTAAATGAGAGATATGAGCTCAACAAAAACCTTGCGCAGATGTTAAAAGGCGGTGTCATCATGGATGT
GACATCTCCAAAAGAGGCTGAGATTGCTGAAAAAGCAGGTGCTGTTGCTGTTATGGCTCTTCAAAAAGTTCCTGCAGACC
TGCGAAAAGAAGGCAAGGTTGCGAGGATGGCTGACCCAAAAATCATTTTGGAAATTAAAAGCGCTGTTTCAATACCTGTT
ATGGCAAAGGTAAGAATTGGACATTTTGTTGAGGCTCAGATTTTAGAAGCACTTGGCATAGATTATATTGATGAGAGCGA
GGTCTTAACCCCTGCTGATGAGGAACATCACATTGACAAGTGGAAGTTCAAAGCTGCGTTTGTGTGCGGTGCAAGAGATT
TGGGTGAGGCTTTGAGAAGAATTCAAGAGGGTGCTTCCATGATAAGAACAAAAGGTGAGGCTGGGACAGGAAATGTTGTT
GAGGCGGTAAGACACCTTCGCAGAATAAACAAGCAAATTAGCTATGCAGCATCACTGAGCGAAGATGAGCTATATGCATA
TGCAAAGGAGCTTGGAGTATCCTATGAACTTTTGAAAAAGACAGCTCAGCTCAAGCGTCTTCCTGTTGTCAACTTTGCAG
CAGGCGGAATTGCAACACCGGCTGACGCAGCTTTAATGATGCAGCTTGGTGCAGATGGCGTGTTTGTTGGCTCTGGCATT
TTCAAGAGCAAAAATCCTGAGAAAAGAGCAAGGGCAATTGTGATGGCAACAACATATTACAATGACCCAAAAATCTTGGC
AGAAAAATCATACGACCTTGGAGAAGAGATGGAAGGTATAGATTTGAGAACTCTTTCCGAGCATGAACAATTGCAATTTA
GGGGGAATTAA

Protein sequence :
MSEVVNERYELNKNLAQMLKGGVIMDVTSPKEAEIAEKAGAVAVMALQKVPADLRKEGKVARMADPKIILEIKSAVSIPV
MAKVRIGHFVEAQILEALGIDYIDESEVLTPADEEHHIDKWKFKAAFVCGARDLGEALRRIQEGASMIRTKGEAGTGNVV
EAVRHLRRINKQISYAASLSEDELYAYAKELGVSYELLKKTAQLKRLPVVNFAAGGIATPADAALMMQLGADGVFVGSGI
FKSKNPEKRARAIVMATTYYNDPKILAEKSYDLGEEMEGIDLRTLSEHEQLQFRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-78 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-77 64
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-78 63