Gene Information

Name : Calla_1439 (Calla_1439)
Accession : YP_004799028.1
Strain : Caldicellulosiruptor lactoaceticus 6A
Genome accession: NC_015949
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : -
Position : 1506248 - 1507573 bp
Length : 1326 bp
Strand : -
Note : KEGG: cki:Calkr_0897 pyrimidine-nucleoside phosphorylase; TIGRFAM: Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; Pyrimidine nucleoside phosphorylase, C-terminal

DNA sequence :
ATGCTGGTAACAGAGATTATTAGAAAAAAAAGAGATGGAGATATCTTGAGTAAAGAAGAACTTGAATTTATTGTGAATGG
GTATGTAAAAGGCGAAATTCCAGACTATCAGATGTCTGCTTTCTTGATGGCTATATATTTTAGAGGAATGTCAAAAGAAG
AGCTTGTAGAACTTACCATGCTCATGGCAAAATCAGGCAAGATGGTAGACCTGAGCAGTATAGAGGGTATCAAGGTTGAC
AAACACTCAAGTGGTGGTATTGCTGACACAACAACCCTGGTCTTAATACCACTGGCAGCATCTTGCGGTGTAAAGGTTGC
AAAGATGTCAGGACGTGGACTTTCTCACACAGGTGGGACAATTGACAAGTTAGAGTCAATTCCAGGTTTTAAAACAGAGC
TTTCAGAGGATGAGTTTGTACAAGCTGTAAATAAAGTTGGTGCGGCAATTGTAGGGCAGTCAGAAAGCCTTGTTCCTGCA
GACAAAAAGATATATGCTTTAAGAGATGTCACATGTACAGTTGAATCTATACCACTTATAGCATCTTCTATCATGAGCAA
AAAGATTGCAGCTGGTAGCGACAAAATAATACTTGATGTCAAGTTTGGCAAAGGTGCTTTCATGAAAGAGTATGAAAAGG
CAAAAGAGCTTGCTAATACCATGGTTGAGATTGGAACTTTGGCAGGAAGAGAAACTGTGGCATATGTTACAGATATGAAC
CAGCCACTTGGTCTTATGATTGGCAACGCTCTTGAGGTTATTGAAGCAATAGAGGTCTTAAAAGGCAAGGGACATGAAGA
TTTGAAGAATCTTTGTATTGAATTTGCATCTGAGATGATGATTATGGCTGGGGTTGAAAAGGAGAAAAAATTAGCACAAG
AAAGAGCAATTGAGAGCATTGAAAAGGGATTTGCTCTTGAAAAGTTTAGAGAAATTATAAAAAACCAAGGTGGAAACCCT
GAAATAGTTGACAATTATTCTTTGCTACCACAAGCCAAATATACTTATGAACTAAAATGCGATGATGATATGTATATAAA
GGACATCGATGCACTCAAACTTGGGCTTTGTGCGCTAAAACTTGGAGCAGGAAGACAAAGAAAAGAAGACAAAATTGACT
ATGCGGTTGGAATTCAACTTTTTGGTAAAATAGGTGATAAAATAGCCAGGAATATGCCGTTTGCTAAAATCTATGCAAAT
GATGAAAAAAGGCTTGAAGAAGCCATCTCAGATGTGAAAACTGCATTTGAGTTTTCTCGGGAACCTGTTCCAAAAAGAAA
AGTAATATTTGCAAAGATAACAAAAGATGATGTTTTTGAATTTTAA

Protein sequence :
MLVTEIIRKKRDGDILSKEELEFIVNGYVKGEIPDYQMSAFLMAIYFRGMSKEELVELTMLMAKSGKMVDLSSIEGIKVD
KHSSGGIADTTTLVLIPLAASCGVKVAKMSGRGLSHTGGTIDKLESIPGFKTELSEDEFVQAVNKVGAAIVGQSESLVPA
DKKIYALRDVTCTVESIPLIASSIMSKKIAAGSDKIILDVKFGKGAFMKEYEKAKELANTMVEIGTLAGRETVAYVTDMN
QPLGLMIGNALEVIEAIEVLKGKGHEDLKNLCIEFASEMMIMAGVEKEKKLAQERAIESIEKGFALEKFREIIKNQGGNP
EIVDNYSLLPQAKYTYELKCDDDMYIKDIDALKLGLCALKLGAGRQRKEDKIDYAVGIQLFGKIGDKIARNMPFAKIYAN
DEKRLEEAISDVKTAFEFSREPVPKRKVIFAKITKDDVFEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 4e-82 43