Gene Information

Name : Calla_0131 (Calla_0131)
Accession : YP_004797794.1
Strain : Caldicellulosiruptor lactoaceticus 6A
Genome accession: NC_015949
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 160999 - 161676 bp
Length : 678 bp
Strand : +
Note : KEGG: cki:Calkr_2318 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGATCGAACTTTATGATATCTACAAAATCTACAAGATGGGCGAAAATGAGGTGTCTGCTTTAAACGGTGTCAGCTTGAA
AATCAATGCTCACGAGTTTGTTGCAATAGTTGGGCCATCCGGTTCAGGAAAATCAACCCTGATGAACATCATAGGCTGCC
TTGACACGCCAACATCCGGCACATACATACTGGATGGTCATGAGGTCAGCAGACTCAACGACAACCAGCTTGCAGAGATT
CGAAACAGCAAGATAGGCTTTGTGTTTCAAAACTTTAACTTAATACCGCAGCTCACAGCTCTTGAAAATGTTGAGCTTCC
TTTAATCTACAAAGGTGTTCCAGCCTCTGCACGTCACAGGCTTGCAAAAGAAGCTTTGGCAAGGGTCGGCTTGGAACATA
GAATGCATCACAGACCAAGAGAGCTATCTGGCGGTCAGCAGCAGAGGGTTGCAATTGCAAGGGCGCTTGTGACAAGTCCG
CCGATAATTCTGGCTGATGAGCCAACGGGAAATTTGGACTCAAAATCAGGTGCTGAGATTATGCAGATTTTCAAAGAGCT
TCACGCTCAAGGAAACACCATTGTTTTAATCACGCACGACAACAACATTGCCATGCAGGCAAAAAGGATTGTGAGGATTC
AAGACGGCCAAATAATAGAGGACAAGGAGGTGAGCTGA

Protein sequence : 
MIELYDIYKIYKMGENEVSALNGVSLKINAHEFVAIVGPSGSGKSTLMNIIGCLDTPTSGTYILDGHEVSRLNDNQLAEI
RNSKIGFVFQNFNLIPQLTALENVELPLIYKGVPASARHRLAKEALARVGLEHRMHHRPRELSGGQQQRVAIARALVTSP
PIILADEPTGNLDSKSGAEIMQIFKELHAQGNTIVLITHDNNIAMQAKRIVRIQDGQIIEDKEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-38 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calla_0131 YP_004797794.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-62 58
Calla_0131 YP_004797794.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-43 50
Calla_0131 YP_004797794.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-49 49
Calla_0131 YP_004797794.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-41 47
Calla_0131 YP_004797794.1 ABC transporter-like protein NC_012469.1.7686946. Protein 5e-30 41