Gene Information

Name : lolD (HAH_1642)
Accession : YP_004796237.1
Strain :
Genome accession: NC_015948
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1581237 - 1581938 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGACTGACCCCGTCCTCGTCGGCTCGGAGTTGTGTGTCACACGACGGGGCACCAGGATTCTCGACGGCGTCTCACTCTC
GGTCGGGTCCGATGCGGCGATGCTCGTTCAGGGCCCTAGCGGGGCCGGCAAGTCGACGCTGTTCAACGTCCTCGGATTGC
TAGAATCACCGTCTAGCGGTCGACTGGAGATCGACGGTCGGGACGCGAGTACCCTGTCCGAACGCCAGCGCGCGAGCCTG
CGGCGGACGACGCTCGGGTTCGTCTTTCAGGACTTCCAGCTCATCGGCGATCTGACCGCTCGCGAGAACGCGTCGCTCCC
GCAGGAACACGCGGGCGACCGCGACCCAGACTGGCTGGACACGCTGTTCGACCGCCTCGGTATCGCCGGGCTCGAACACC
AGTACCCTGCGACGCTGAGCGGGGGCGAGAAACAGCGCGTCGCCATCGCACGGGCGCTCGCGAACCGCCCCGAGGTGATC
CTCGCCGACGAGCCGACCGGGCAGCTAGATCCGGACACGGCCGAGTCGGTGCTGAACCTTCTGTTCAGCATGAAGGAATC
GACGGAAACCGCGCTCGTCGTCATCAGCCACGACCCCCAACTGGCCCAGCGGTTCGACGAGCGGCTGTTCATCCGCGGCG
GCACGCTCGTCTCCGATGCCGCCTCGACGCCGGACGCGAGCCCGTCCACGGAGACGAACTAA

Protein sequence : 
MTDPVLVGSELCVTRRGTRILDGVSLSVGSDAAMLVQGPSGAGKSTLFNVLGLLESPSSGRLEIDGRDASTLSERQRASL
RRTTLGFVFQDFQLIGDLTARENASLPQEHAGDRDPDWLDTLFDRLGIAGLEHQYPATLSGGEKQRVAIARALANRPEVI
LADEPTGQLDPDTAESVLNLLFSMKESTETALVVISHDPQLAQRFDERLFIRGGTLVSDAASTPDASPSTETN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_004796237.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-28 43