Gene Information

Name : BurJV3_0489 (BurJV3_0489)
Accession : YP_004791049.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Virulence
Product : two component winged helix family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 542438 - 543157 bp
Length : 720 bp
Strand : +
Note : KEGG: smt:Smal_0470 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver reg

DNA sequence :
ATGTCCACCAAACGCGTGCTGATCGTTGAAGACGATGCCCACATCGCCGACCTGCTGCGCATGCATCTGGGTGATGAGGG
TTACGACGTCGCCCATGCCGCCAGCGGCGATGCCGGCCTGCGCCTGCTCGAGCAGGACGGCCCGTGGGATGCGCTGGTGC
TGGACGTGATGCTGCCCGGCGTGGACGGGCTGCAGGTGTGCCAGCGTGCACGCGCGATGGCGCGCTATGTCCCGATCATC
ATCATCAGTGCGCGCGGCAGCGAAACGCAGCGCATCGTCGGCCTGGAACTGGGCGCGGACGATTACCTGGCAAAACCCTT
TTCGATGCCGGAACTGGTGGCACGGGTGCGCGCGCTGCTGCGCCGCGCCGAGGCGATGGCGCAGAGCGCGCGCATCGATG
CCGGCGCGATCGAACTGGGTGGGCTGCAGCTCGATCCGGTCGCGCGCACCGCCTCGGTGGATGGCAACGCGCTGGAGCTG
ACCCCGCGCGAGTTCGATCTGCTGTTGTTCTTCGCCCGTCATCCGGACCAGGTGTTCGCGCGCATGGAACTGCTCAACCA
GGTCTGGGGCTACCAGCACGATGGTTACGAGCACACGGTCAATACCCACATCAACCGCCTGCGCAGCAAGATCGAACCCG
ACCCGGCCAACCCACGGCGGTTGCTGACGGTGTGGGGCCGCGGCTACAAGCTGGTCGACCCGGCCGGGGCGGCGGCATGA

Protein sequence :
MSTKRVLIVEDDAHIADLLRMHLGDEGYDVAHAASGDAGLRLLEQDGPWDALVLDVMLPGVDGLQVCQRARAMARYVPII
IISARGSETQRIVGLELGADDYLAKPFSMPELVARVRALLRRAEAMAQSARIDAGAIELGGLQLDPVARTASVDGNALEL
TPREFDLLLFFARHPDQVFARMELLNQVWGYQHDGYEHTVNTHINRLRSKIEPDPANPRRLLTVWGRGYKLVDPAGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-62 58
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-62 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_012469.1.7685629. Protein 5e-37 45
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator AF155139.2.orf0.gene Protein 2e-36 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_012469.1.7686381. Protein 3e-37 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_002952.2859905.p0 Protein 2e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_009782.5559369.p0 Protein 4e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_002951.3237708.p0 Protein 4e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_007622.3794472.p0 Protein 3e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_002758.1121668.p0 Protein 4e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_009641.5332272.p0 Protein 4e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_013450.8614421.p0 Protein 4e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_007793.3914279.p0 Protein 4e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_003923.1003749.p0 Protein 4e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator NC_002745.1124361.p0 Protein 4e-38 42
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator HE999704.1.gene1528. Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator VFG1563 Protein 7e-63 58
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator VFG1702 Protein 7e-63 58
BurJV3_0489 YP_004791049.1 two component winged helix family transcriptional regulator VFG1389 Protein 4e-28 45