Gene Information

Name : BurJV3_3359 (BurJV3_3359)
Accession : YP_004793901.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3719620 - 3721464 bp
Length : 1845 bp
Strand : -
Note : TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: sml:Smlt3909 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGCACAGCTCTCCGCCCTGCAGCAACAGGCCCAGCAACTCTCCGAATCCGTGACCCGGCCGATTCCCGGTTCGCG
CAAGATCCATGTACCCGGTTCGCGTCCGGATCTGCAGGTGCCGATGCGCGAGATCGCGTTGACCCGCACGCCGACGCTGT
TCGGCGGCGAAGAGAACGCACCGGTCACGGTCTACGACACGTCGGGTCCCTACACCGATCCGGACGTGCGTATCGATCTC
TCGGCGGGCCTGCCGGCGCTGCGTCGTGGCTGGGTGGAGGAGCGCGGCGATACCGAACAACTCGACGGCCTGAGTTCGTC
GTTCGGCCGCGACCGCGAGCATGATCCGAAGCTCGATGCCGTGCGCTTCCCTGCGCGCAGCCTGCCGCGCCGTGCCCGTG
CAGGTGCGAACGTCACCCAGATGCACTACGCGCGCCGCGGCATCATCACGCCGGAAATGGAATTCGTCGCCATCCGCGAG
AACCAGCGGCTGGACGCGATCCGCGATGCCGGCCTGCTGCAGCAGCACCCGGGCGAGGCGTTCGGGGCTTCGATCCAGAA
GATCATCACGCCGGAGTTCGTGCGCGAGGAAATCGCGCGCGGCCGCGCGGTGCTGCCCAACAACATCAACCATCCGGAAA
GCGAGCCGATGATCATCGGCCGCAATTTCCTGACCAAGATCAATGCCAACATCGGCAACAGCGCCGTGTCCTCGGGCATT
GCCGAGGAAGTGGAGAAACTGGTGTGGGCGATCCGCTGGGGCGGTGACACGGTGATGGACCTGTCCACCGGCAAGCACAT
CCACGAAACCCGCGAGTGGATCATCCGCAATTCGCCGGTGGCGATCGGTACCGTGCCGATCTACCAGGCGCTGGAGAAGG
TCGATGGCCGTGCCGAAGCACTCACCTGGGAGATCTTCCGCGACACGCTGATCGAGCAGGCCGAACAGGGCGTGGACTAC
TTCACCATCCACGCCGGCGTGCTGCTGCGCTATGTGCCGCTCACCGCCAAGCGGGTCACCGGCATCGTCAGCCGCGGTGG
CTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAGGAGAACTTCCTCTACACGCACTTCGAAGAAATCTGCGAGATCA
TGAAGGCCTACGACGTGACCTTCTCGCTGGGTGACGGCCTGCGCCCGGGCTGCATCGCCGATGCCAACGACGCGGCGCAG
TTTGGTGAGCTGGAGACGCTGGGTGAGCTGACGAAGATCGCCTGGAAGCATGATGTGCAGACCATGATCGAAGGTCCCGG
CCACGTGCCGATGCAGCTGATCAAGGAGAACATGGACAAGCAGCTGCGCGAGTGCGGCGAAGCGCCGTTCTATACGCTGG
GGCCGCTGACCACCGATATCGCACCGGGCTACGACCACATCACCAGCGCGATCGGTGCGGCGATGATCGGTTGGTTCGGC
ACGGCGATGCTCTGCTACGTGACGCCGAAGGAGCACCTCGGCCTGCCCAACCGCCAGGACGTGCGGGACGGCATCATGGC
CTACCGCATCGCCGCGCATGCGGCCGACCTGGCCAAGGGCCATCCGGGTGCGCAGGTGCGCGACAACGCGCTGAGCAAGG
CGCGCTTCGAGTTCCGCTGGGAAGACCAGTTCCACCTTGGCCTGGATCCGGAGAAGGCCAAGGAGTTCCATGACGAGACG
CTGCCGAAGGATGCGCACAAGCTGGCGCACTTCTGCTCGATGTGCGGCCCGCACTTCTGTTCGATGAAGATCACCCAGGA
CGTGCGTGACTATGCCGAGGCCGGCATGAAGGAGAAGTCGGAAGAGTTCCGCGCCGCCGGCGCCGAGGTCTACCGCCAGG
GCTGA

Protein sequence :
MNAQLSALQQQAQQLSESVTRPIPGSRKIHVPGSRPDLQVPMREIALTRTPTLFGGEENAPVTVYDTSGPYTDPDVRIDL
SAGLPALRRGWVEERGDTEQLDGLSSSFGRDREHDPKLDAVRFPARSLPRRARAGANVTQMHYARRGIITPEMEFVAIRE
NQRLDAIRDAGLLQQHPGEAFGASIQKIITPEFVREEIARGRAVLPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVAIGTVPIYQALEKVDGRAEALTWEIFRDTLIEQAEQGVDY
FTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEEICEIMKAYDVTFSLGDGLRPGCIADANDAAQ
FGELETLGELTKIAWKHDVQTMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYRIAAHAADLAKGHPGAQVRDNALSKARFEFRWEDQFHLGLDPEKAKEFHDET
LPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAEAGMKEKSEEFRAAGAEVYRQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 74
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72