Gene Information

Name : BurJV3_3301 (BurJV3_3301)
Accession : YP_004793843.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3664354 - 3665079 bp
Length : 726 bp
Strand : +
Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: smt:Smal_3270 ribonuclease PH

DNA sequence :
ATGTCCGATTCCCGCCCCAGCGGCCGCCAGCCCGACCAGCTCCGCCCGGTCGTCATCCAACGCGGCTTCACCCGCCACGC
CGAAGGTTCGGTGCTGGTCTGCTTCGGTGAAACCCGCGTGCTGTGCACCGCCAGCGTCGAGAACCGCGTGCCGGGCTTCC
TGCGCGGCAAGGGCGAAGGCTGGGTGACCGCCGAGTACGGCATGCTGCCGCGCGCCACCCACACCCGCAGCGACCGCGAA
GCGGCCCGTGGCAGGCAGGGCGGCCGCACGCTGGAGATCCAGCGCCTGATCGGCCGCAGCCTGCGTGCCTGCGTGGACCG
CAACGCGCTGGGCGAGCGCACCATCACCCTCGACTGCGACGTGCTGCAGGCCGACGGTGGCACCCGCACCGCCGCCATCA
CCGGCGCCTACGTGGCCCTGGTCGATGCGGTGAACGTGCTGATGAAGCGTGGCGACATCAAGCGCAACCCGATCCTGGGC
GCAGTGGCCGCCGTGTCGGTGGGCGTGTACCGCGGCACCCCGGTGCTGGACCTGGACTACGCCGAAGACAGCGACTGCGA
CACCGACATGAACGTGGTGATGAACGACGGCGGTGGCTTCATCGAACTGCAGGGCACCGCCGAAGGCCATGCCTTCCGTC
GCGACGAGCTGGACGCGCTGCTGGGCCTGGCTGAAAAGGGCGTGCGCGAGCTGCTGGACGCACAGCAGGCGGCGCTGTCG
GCATGA

Protein sequence :
MSDSRPSGRQPDQLRPVVIQRGFTRHAEGSVLVCFGETRVLCTASVENRVPGFLRGKGEGWVTAEYGMLPRATHTRSDRE
AARGRQGGRTLEIQRLIGRSLRACVDRNALGERTITLDCDVLQADGGTRTAAITGAYVALVDAVNVLMKRGDIKRNPILG
AVAAVSVGVYRGTPVLDLDYAEDSDCDTDMNVVMNDGGGFIELQGTAEGHAFRRDELDALLGLAEKGVRELLDAQQAALS
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 7e-61 58