Gene Information

Name : BurJV3_2654 (BurJV3_2654)
Accession : YP_004793200.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 2927486 - 2928916 bp
Length : 1431 bp
Strand : -
Note : KEGG: sml:Smlt3204 replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal

DNA sequence :
ATGTCCGCTCGTCCCGGCTTCCGTTCCAACCGCAGAGAGCGCGGTGATGGCTTCGATCGCGATCGCGACGAGTCGCGCAT
CGACCAGTTGCGGGTACCGCCCCATTCGGTGGAAGCCGAGCAGGCGGTGCTGGGTGGCCTGATGCTGGCGCCCGAGGCGT
ATGACCGGGTCAACGACCAGCTGACCGAAGGCGACTTCTACCGTCGCGATCACCAGATGATCTATCGGGCGATCCGCGAG
CTGTCCGAGCGCGAACGGCCGTTCGATGCGGTGACGCTGGGTGAGTGGTTTGAATCGCAGGGCAAGATGGAACTGGTGGG
CGACGGCGCCTACCTGATCGAACTGGCCAGTACCACGCCGTCGGCGGCCAACATCGTGGCGTACGCCGAGATCGTGCGTG
ACAAGGCGGTGCTGCGGCAGCTGATCCAGGTCGGCACCGACATCGTCAACGACGGTTTCCAGCCCGAAGGGCGTGACAGC
AGCGAGCTGCTGGCCTCGGCGGAAAAGAGCGTGTTCGCCATCGCCGAACAGGGTGCTCGCGGCCGTACCGATTTCGTGGC
CATGCCGGGTGCGCTGAAGGATGCCTTCGAGGAGCTGCGCAACCGCTTCGAGAACGGCGGCAACATCACCGGCCTGCCGA
CCGGTTACAACGATTTCGATGCGATGACCGCCGGCCTGCAGCCGACCGACCTGATCATCCTCGCGGCGCGCCCGGCAATG
GGCAAGACCACCTTCGCGCTGAACATCGCCGAGTACGCGGCGATCAAGTCGAAGAAGGGCGTGGCGGTGTTCTCGATGGA
AATGTCGGCATCGCAGCTGGCGATGCGCCTGATTTCCTCCAATGGCCGCATCAACGCGCAGCGCCTGCGTACCGGCCAGC
TGGAAGATGAGGACTGGAGCCGCGTCACCAGCGCGATCAAGATGCTGAAGGAAACCAAGATCTTCATCGACGATACGCCG
GGCGTGTCGCCGGAAGTGCTGCGTTCCAAGTGCCGTCGCCTCAAGCGCGAGCATGATCTCGGCCTGGTCGTGATCGACTA
CCTGCAGCTGATGAGCGTGCCGGGCAACAGCGAGAACCGTGCAACCGAAATCTCGGAGATCTCACGTTCGCTGAAGGGCC
TGGCCAAGGAACTGAATGTGCCGGTGATCGCGCTGTCACAGCTCAACCGCTCGCTGGAAACGCGTACCGACAAGCGCCCG
GTGATGGCCGACCTTCGAGAGTCGGGCGCAATCGAGCAGGATGCGGACATGATCGTGTTCATCTACCGCGACGACTACTA
CAACAAGGAAAACTCGCCGGACAAGGGCCTGGCCGAGATCATCATCGGCAAGCACCGTGGTGGCCCGACCGGTTCGTGCA
AGCTGAAGTTCTTCGGCGAGTACACCCGCTTCGACAACCTGGCCCACGATTCGGTCGGCTCGTTCGAGTAA

Protein sequence :
MSARPGFRSNRRERGDGFDRDRDESRIDQLRVPPHSVEAEQAVLGGLMLAPEAYDRVNDQLTEGDFYRRDHQMIYRAIRE
LSERERPFDAVTLGEWFESQGKMELVGDGAYLIELASTTPSAANIVAYAEIVRDKAVLRQLIQVGTDIVNDGFQPEGRDS
SELLASAEKSVFAIAEQGARGRTDFVAMPGALKDAFEELRNRFENGGNITGLPTGYNDFDAMTAGLQPTDLIILAARPAM
GKTTFALNIAEYAAIKSKKGVAVFSMEMSASQLAMRLISSNGRINAQRLRTGQLEDEDWSRVTSAIKMLKETKIFIDDTP
GVSPEVLRSKCRRLKREHDLGLVVIDYLQLMSVPGNSENRATEISEISRSLKGLAKELNVPVIALSQLNRSLETRTDKRP
VMADLRESGAIEQDADMIVFIYRDDYYNKENSPDKGLAEIIIGKHRGGPTGSCKLKFFGEYTRFDNLAHDSVGSFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-95 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-90 47
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-89 47
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 6e-80 46
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 7e-88 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-78 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-78 46
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-82 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 9e-66 42