|
Name : BurJV3_2548 (BurJV3_2548) Accession : YP_004793094.1 Strain : Stenotrophomonas maltophilia JV3 Genome accession: NC_015947 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2805560 - 2806840 bp Length : 1281 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: sml:Smlt3092 seryl-tRNA synthetase DNA sequence : ATGCTTGATCCAGCCCTGCTCCGCCACCAGCCCGCCGACCTCGCCGAACGCCTGCGCACCAGCCGCGGCTTCGAGCTCGA CGTGTCTGCCCTGGAGTCCCTGGAGGCTGATCGCAAGCGCATCCAGGTGCGGACCCAGGAGCTGCAGAGCCTGCGCAACA GCCGTTCCAAGGCCATCGGCCAGGCCAAGGCCAAGGGCGAGGATGTCTCGGCCATCATGGCCGAGGTCGCTGCCTTCGCC GACGAGCTGAAGGCTTCGGAAGTGGCGCTGGACGAACTGCGCGAGAAGATTGAAGCGATCTCGATGGGCATTCCGAACCT GCCGGCCGATGACGTGCCGGCCGGTGCCGACGAGAACGACAACGTCGAGCAGGCACGCTGGGGTACCCCGCGCCAGTTCG ACTTCAAGGTGCTCGACCACGTTGAACTGGGCGCCCGCAACGGCTGGCTGGACGGCGAGACCGCGGCCAAGCTGTCCGGT TCGCGCTTCACCGTGCTGCGTGGACCGATCGCGCGCCTGCACCGCGCCCTGGCCCAGTTCATGGTCGACCTGCACACCGG CGAGCACGGCTACGAGGAAACCAACGTGCCGCTGCTGGTCAACGCCGATTCGCTGCGTGGCACCAGCCAGCTGCCGAAGT TCGAGGACGACCTGTTCAAGACCGCCGTGGGTGATTCCACGCGCTACCTGATCCCGACCTCGGAAGTGCCGCTGACCAAC ATCGTGCGCGACGAGATCGTCGACGCCGAGCGCCTGCCGCTGCGCATGACCGCCCACTCGATGTGCTTCCGTGCCGAGGC CGGCAGCGGTGGCCGCGACGTGCGCGGCATGATCCGCCAGCATCAGTTCGAGAAGGTCGAGCTGGTCTCGATCAGCCGCC CGGAGGACAGCGACGCCGAACACCAGCGCATGACCCGTTGCGCCGAAGTGGTGCTGGAAAAGCTGGGCCTGCCGTACCGC AAGGTGCTGCTGTGCACCGGCGACATGGGCTTCTCGGCCATCAAGACCTACGACCTGGAAGTCTGGCTGCCGTCGCAGGA AACCTACCGCGAGATCTCCTCGTGCTCGAACTGTGGTGACTTCCAGGCCCGCCGCATGCAGGCCCGCTGGCGCAACCCGG CCACCGGCAAGCCGGAGCTGGCGCACACGTTGAACGGCTCGGGCGTGGCCGTTGGCCGCGCGATGATCGCGGTGATGGAG AACTACCAGAACGCCGACGGCAGCATCACCGTGCCGGAGGCCCTGCGCCCGTACATGGGGGGCCTGGAAACCATCGCCTG A Protein sequence : MLDPALLRHQPADLAERLRTSRGFELDVSALESLEADRKRIQVRTQELQSLRNSRSKAIGQAKAKGEDVSAIMAEVAAFA DELKASEVALDELREKIEAISMGIPNLPADDVPAGADENDNVEQARWGTPRQFDFKVLDHVELGARNGWLDGETAAKLSG SRFTVLRGPIARLHRALAQFMVDLHTGEHGYEETNVPLLVNADSLRGTSQLPKFEDDLFKTAVGDSTRYLIPTSEVPLTN IVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDVRGMIRQHQFEKVELVSISRPEDSDAEHQRMTRCAEVVLEKLGLPYR KVLLCTGDMGFSAIKTYDLEVWLPSQETYREISSCSNCGDFQARRMQARWRNPATGKPELAHTLNGSGVAVGRAMIAVME NYQNADGSITVPEALRPYMGGLETIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-98 | 53 |
