Gene Information

Name : BurJV3_2448 (BurJV3_2448)
Accession : YP_004792995.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Virulence
Product : amino acid permease-associated protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 2700922 - 2702274 bp
Length : 1353 bp
Strand : -
Note : PFAM: Amino acid permease-associated region; KEGG: smt:Smal_2394 arginine:agmatin antiporter

DNA sequence :
ATGGCAGAAGCAAAGAAAATCGGGGTGGTCGGAGCCACCTTCCTCGTCGCCGGCAACATGATGGGCTCAGGCGTGTTCCT
GTTGCCGTCCAGCCTGGCCAAGATCGGTACCGCTTCGATCTGGGGCTGGCTGATCACCACCGCCGGTGCGCTGCTGCTGG
CCTTCGTGTTCGCCAAGCTGGGCAAGCTGGCACCCAAGGCGGGCGGTCCCTATGCCTACGCGCGTGACTGGTTCGGGCCG
TACATGGGCTTCCAGACCAACACCATCTACTGGTTCGCCAACTGGATCGGCAACGTCGCCATCCCGATCGCGGCGGTGGG
CTACTTCAGCTACTTCTTCCCGATCCTGTCCGAGCCGCTGGTGCGCTGCATCGCGGTGCTGGTGCTGGTGTGGGCGCTGA
GCTTCGCCAACATGATCGGTCCGGCCTTCGTCAGCCGCGTGCAGACGGTCACCACCAGCTTCGCGCTGGTGCCGATCCTG
GGCATCGCCATCTTCGGCTGGTTCTTCTTCGATGCCGACATCTTCAAGGGCGCCTACAACGTGTCGGGTGAATCCAACTT
CGGCGCGATTTCCAGCGCTGCGGCGCTCACGCTGTGGGCCTTCATCGGCGTGGAGTCGGCTTCGGTGACCGCCGGCGTGG
TGGAGAACCCGGAAAAGAACGTGGCCCGCGCCACGCTCGCCGGTGTGTTCCTGGCTGCCATCGCCTACATCGCCAGCTCC
TCGGTGATCATGGGCATGGTGCCGAACTCGGAACTGCAGGTGTCCGATGCGCCGTTCGCACTGGCCGCGGCCAAGGCGGT
GGGGGGCTGGGGCGGTGCACTGGTCAGCCTGTGCGCCTTCATCGGCGCTGCCGGTTCGCTGGGCGGCTGGATCCTGCTGA
CCGCACAGAGCGCCAAGGCGGCCTCCGATGACGGCCTGTTCCCGAGCATCTTCAGCAAGACCAACAAGGATGACGTGCCG
GTCAAGGGCGTGCTGATCGTGGCGGTGTTGATGACCCTGGCGGTGCTGGTCACCTCCACCTCGGAAACCGCGTCGGCCCA
GTTCGACGTGATCACGTCGGCGGCGGTGGTGCTGACCCTGCTGCCCTACATCTACTCGTGCGTGGCCTGCTACTTCGTGG
TCGAGCGCTCGCACACTCTGGTCCACACCGGTGCGTTCTGGACCCTGACCAGCCTGACCGTCGTGTACTGCCTGTGGGCG
ATCTACGGCTCGTCGGGAACCATCGTGCAGTACGCCTTCCTGTTCGTGCTGTTCATCACCGTGTTCTATCCCTTCTTCAG
CGAGGAGCGCCGCCAGCAGCGGCAGCGCGCCCGCGAGGCATCGGCGATCAGCGCCGGCGCCCAGCGTTCCTGA

Protein sequence :
MAEAKKIGVVGATFLVAGNMMGSGVFLLPSSLAKIGTASIWGWLITTAGALLLAFVFAKLGKLAPKAGGPYAYARDWFGP
YMGFQTNTIYWFANWIGNVAIPIAAVGYFSYFFPILSEPLVRCIAVLVLVWALSFANMIGPAFVSRVQTVTTSFALVPIL
GIAIFGWFFFDADIFKGAYNVSGESNFGAISSAAALTLWAFIGVESASVTAGVVENPEKNVARATLAGVFLAAIAYIASS
SVIMGMVPNSELQVSDAPFALAAAKAVGGWGGALVSLCAFIGAAGSLGGWILLTAQSAKAASDDGLFPSIFSKTNKDDVP
VKGVLIVAVLMTLAVLVTSTSETASAQFDVITSAAVVLTLLPYIYSCVACYFVVERSHTLVHTGAFWTLTSLTVVYCLWA
IYGSSGTIVQYAFLFVLFITVFYPFFSEERRQQRQRAREASAISAGAQRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 6e-56 45
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 2e-49 42
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 1e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BurJV3_2448 YP_004792995.1 amino acid permease-associated protein VFG1671 Protein 3e-56 45