|
Name : BurJV3_2258 (BurJV3_2258) Accession : YP_004792806.1 Strain : Stenotrophomonas maltophilia JV3 Genome accession: NC_015947 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2495311 - 2496510 bp Length : 1200 bp Strand : - Note : KEGG: sml:Smlt2740 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain DNA sequence : ATGGCATTGTTCGACTACCAGGCCGCCAACGCGCAGGGCCGCATCGAGAAGGGCCAGTTGGACGCCGACAGCCCGCGCGG CGCGCGCCAGGTGCTGCGCGGTCGTGGGCTGACGCCCGTGCAGGTCAGCGCGGCGCGCAGTGCGGGCAGTGGCTGGGGCA CGCGCCGGCTGTCCGCCAGCGAGTTGGCCTGGGCCACGCGCCAACTGGCCAGCCTGCTGGCCGCGAGCCTGCCGTTGGAA GGTGCATTGAGCGCGGTGATCGAACAGGCCGAGCGCCCGCATGTGGCCCAGGCACTCACCGCCGTACGCGCCGACGTGCG TGCCGGCCAGCGCCTGACCGTGGCATTGGCTGCACGGCCACGTGATTTTCCGCCGATCTACCGGGCGCTGGTGGGCGCCG GTGAGGACTCCGGCGATCTGGCACGGGTGATGGAGCGCCTGGCCGACTACATCGAAGAACGCAACGCGCTGCAGGCCAAG GTGCTGACCGCCTTCATCTACCCGGCGGCGATCAGCCTGGTGTCAGTGGCGATCGTGATCTTCCTGCTCAGCTACGTGGT GCCGCAGGTGGTGACCGCATTCGTGCAGGCGCGGCAGACGCTGCCGATGCTGACCCAGGTGATGCTGGCGGCCAGCGCGT TCGTGCGCAGCTGGGGCGTGTGGGCAGGGCTCGGCATCGCTGCGCTGGTGGTGGCATGGCGGTTGGCGTTGCGCCGGCCC GAACTGCGCCTGCGCTGGGACGCGATGCTGCTGCGGGTGCCGATGGTCGGACGCTTCGTGCTGGGTGTGAACAGTGCGCG CTTCGCCTCGACGCTGGCGATCCTGCTGGATGCCGGTGTGCCGCTGCTGCGTGCACTGGAAGCAGCGCGACAGACCCTGG GAAACGCGCTGCTGGCGCGCTGTGCCGATGATGTGGCTGCGCGCGTACGCGAAGGTGCGGCACTGGGTGCTGCGTTGAAG GTGCAGAAAGTGTATCCGCCGATCCTGGTGCACCTGGTGGCCAGCGGCGAGAAGACCGGTTCGCTGGCGCCACTGCTGGA CCGCGCCGCACAGACGATCTCGCGCGAGATCGAGCGCCGCGCGATGGCACTGACCGCACTGCTGGAACCGACCATGATCC TGGTGATGGGCGGCGTGGTGTTGACGATCGTGCTGGCGGTGCTGATGCCGATCATGGAAATGAACCAGCTGGTGCAGTAG Protein sequence : MALFDYQAANAQGRIEKGQLDADSPRGARQVLRGRGLTPVQVSAARSAGSGWGTRRLSASELAWATRQLASLLAASLPLE GALSAVIEQAERPHVAQALTAVRADVRAGQRLTVALAARPRDFPPIYRALVGAGEDSGDLARVMERLADYIEERNALQAK VLTAFIYPAAISLVSVAIVIFLLSYVVPQVVTAFVQARQTLPMLTQVMLAASAFVRSWGVWAGLGIAALVVAWRLALRRP ELRLRWDAMLLRVPMVGRFVLGVNSARFASTLAILLDAGVPLLRALEAARQTLGNALLARCADDVAARVREGAALGAALK VQKVYPPILVHLVASGEKTGSLAPLLDRAAQTISREIERRAMALTALLEPTMILVMGGVVLTIVLAVLMPIMEMNQLVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-53 | 41 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BurJV3_2258 | YP_004792806.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-66 | 45 |
| BurJV3_2258 | YP_004792806.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-50 | 41 |
