Gene Information

Name : BurJV3_1934 (BurJV3_1934)
Accession : YP_004792485.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 2134025 - 2135419 bp
Length : 1395 bp
Strand : -
Note : TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; KEGG: sml:Smlt2286 flagellum-specific ATP synthase; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGAACCCGGAATCGCAAGCCGCGCCGCAACCGGCGCCAGCGGCCGACTGGGCCATGGCCCGCAACCTGCGCCTGGCCAG
CCGCCTGGATGGCCTGCGCGTGGACACCGCGCATGGTCGCGGCCTGATCCGCGAGGGCGTGCTGCGCCGCGCGGTCGGCC
TGACCCTGGAAGCCGTCGGCTGCGAGGCACCGCTGGGTGCGAGCTGCAAGGTGGAAGTGGTCGATGGGGGCTGGGTCGAC
GCCGAAGTGGTCGGCTTCGCCGGCGAACGCACCTACCTGATGCCCAGCGCCGAACTGCACGGCCTGCTGCCCAATGCGCG
GGTGGTACCGTCGGCGCGACGTGGTGGCGTGGAAGTGGGTGAAGGCCTGCTCGGCCGCGTCATCGACAGCGACGGCGTGC
CGCTGGATGGCAAGGGCCCGATCCGCGCCGAAGGGCATGTCGGCATGGCCGGCGTCTCGATCAATCCGTTGGCGCGTGAA
CCGATCACCCAGCCGCTGGACGTGGGCGTGCGCGCGATCAACGCGCTGCTGCCGATCGGCCGCGGCCAGCGTGTCGGCCT
GTTCGCCGGTTCCGGCGTCGGCAAGTCGACGCTGCTGGGCATGATGACCCGCTACACCGCCGCCGACGTGATCGTGGTCG
GCCTGATCGGTGAACGTGGCCGCGAAGTCCGCGATTTCGTCGAGACCACGCTGGGCGAGGAAGGCCTGCGCCGTGCCGTG
GTGGTCGCCAGCCCCGCCGACCGGCCGCCGCTGGCGCGCCTGCACGGTGCTTACCGTGCCACCGCCATCGCCGAGTGGTT
CCGCGACCAGGGACTGAACGTGCTGCTGCTGATGGACTCGCTGACCCGCTTCGCCCAGGCGCAGCGCGAGATCGGCCTGT
CGGTCGGCGAACCACCGACCACCCGCGGCTACCCGCCGTCGGTGTTCGCCAAGCTGCCGGCGCTGGTCGAACGCGCCGGC
AACGGCGCCAAGGGCCGCGGCTCGATCACCGCGTTCTACACGGTGCTGACCGAAGGCGATGACCCGCAGGATCCCATCGC
CGACGCCGCGCGCGCGATCCTCGATGGCCACATCCTGCTCTCGCGCCGCGTGGCCGACAGCGGCCTGTACCCGGCCATCG
ATGTTGAATCGTCGGTCAGCCGCGTGGTCACGGAAATCGCCGACGAACCGTGGCGCCTGCGCATCCGCAAGTTGAAGCGA
CTGGTCTCGGCCTACTCGGCCAACCGTGACCTGATCGCGATCGGTGCCTACCAGCGTGGCAACGACGCGGCCACCGACGA
AGCCCTGGAACGCTGGCCGGAAATCATGGAGTTCCTCGGCCAGGACGTTGCCAAGGCCGCAGATCTCCCGCACAGCCAGG
CGGCGCTGCAGCGCCTGGTGGAACAAGAGAGTTAA

Protein sequence : 
MNPESQAAPQPAPAADWAMARNLRLASRLDGLRVDTAHGRGLIREGVLRRAVGLTLEAVGCEAPLGASCKVEVVDGGWVD
AEVVGFAGERTYLMPSAELHGLLPNARVVPSARRGGVEVGEGLLGRVIDSDGVPLDGKGPIRAEGHVGMAGVSINPLARE
PITQPLDVGVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAV
VVASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAG
NGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDVESSVSRVVTEIADEPWRLRIRKLKR
LVSAYSANRDLIAIGAYQRGNDAATDEALERWPEIMEFLGQDVAKAADLPHSQAALQRLVEQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-82 50
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-84 50
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-84 50
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-82 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-69 50
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-68 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-68 50
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-69 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-69 50
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-83 49
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-83 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-84 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-84 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-84 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 8e-80 49
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-76 48
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-62 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 4e-69 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 5e-63 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-63 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-64 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-63 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-62 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 8e-63 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 7e-63 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-59 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-59 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-65 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 3e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG1254 Protein 5e-112 59
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG2499 Protein 7e-109 58
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG2331 Protein 5e-101 57
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG0192 Protein 2e-78 51
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-69 50
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-78 49
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG0390 Protein 7e-79 48
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-76 46
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG2459 Protein 4e-64 41
BurJV3_1934 YP_004792485.1 flagellar protein export ATPase FliI VFG1008 Protein 1e-59 41