Gene Information

Name : BurJV3_1151 (BurJV3_1151)
Accession : YP_004791709.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein mutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1285442 - 1288033 bp
Length : 2592 bp
Strand : -
Note : SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: sml:Smlt1387 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA

DNA sequence :
ATGTCCAAAGAAAAGTCCGCCGAACACACCCCGCTGATGAAGCAGTTCTTCGCAGCCAAGTCCGACTACCCGGACCTGCT
GCTGTTCTTCCGCATGGGCGACTTCTACGAGCTGTTCTACGACGATGCGCGCAAGGCCGCGCGCCTGCTCGACATCACCC
TGACCCAGCGCGGCAGCTCCGGCGGCGCGCCGATCCCGATGGCCGGCGTGCCGGTGCACGCCTATGAAGGCTACCTGGCA
CGGCTGGTGGCGCTGGGCGAATCAGTGGCGATCTGCGAGCAGATCGGCGACCCGGCGCTGGCCAAGGGTCTGGTCGAACG
CAAGGTGGTGCGCATCGTCACCCCCGGCACCGTCACCGACGAAGCACTGCTGGACGAACGCCGCGATACCCTGCTGATGG
CCCTGTCGCGCACGAAGCAGGGCTACGGCCTGGCCTGGGCCGACCTGGCCGGTGGCCGCTTCCTGGTCAACGAAGTCGAG
ACCGACGACGCGCTGGAAGCCGAACTGGCCCGACTGGAGCCAGCCGAGCTGCTGGTACCCGACGAAGAGAACTGGCCCGA
CTTCCTGCGCCAGCGCACCGGCGTGCGCCGCCGTGCGCCGTGGCTGTTCGACGCCGACAGCGGCCGCCGCCAGCTGCTGA
ACTTCTTCAAGCTGCATGACCTGAGCGGCTTCGGCATCGATGACAAGCCGCGCGCCACCGCTGCCGCCGGCGCCCTGCTC
GGCTATGTCGAGGAAACCCAGAAGCAGCGCCTGCCGCACCTGACCTCGATCGCGATGGAAACCGCTGGCGAGGCGATCGC
GATGAACGCCGCCACCCGCCGCCACCTGGAACTGGATACGCGCGTCGACGGCGATACCCGCAACACCCTGCTGGGCGTGC
TCGACAGCACGGTAACGCCGATGGGCGGGCGCCTGCTGCGCCGCTGGCTGCACCGCCCGCTGCGCCTGCGCGAGGTGCTG
GTGCAGCGCCACCATGCGGTGGAAACCCTGATCGACCGTGGCAGCGACGCCGACATCCGCGAGCAGTTCCGCCGCCTCGG
TGACCTGGAACGCATCCTCACCCGCGTCGCACTGCGTTCGGCGCGCCCGCGCGATTTCTCCACCCTGCGCGATGGCCTGG
GCCTGCTGCCGGCGGTGCGCGAGGTGCTGGCGCCGCTGGATTCGCCGCGCCTGCAGGCGCTGCATGCCGCGCTGGGTGAA
CATGACGAATGCGCACAGCTGCTGGCCAGCGCCATCGCCGAGATGCCGCCGCTGAAGCTGAGCGATGGCGGCGTGCTGGC
CGACGGCTTCGATGAAGAGCTGGACGAACTGCGCCGCCTGTCCACCCATGCCGACCAGTTCCTGGTCGACCTGGAACAGC
GCGAGCGCGAGAGCAGCGGCATTCCCACCCTGAAGGTGGGCTACAACCGCGTGCACGGTTACTACATCGAAATCAGCAAG
GGCCAATCCGACCGCGCGCCGGTGCACTACACCCGCCGCCAGACGCTGACCAATGCCGAGCGCTACATCACCGAAGAACT
GAAGGCGTTCGAGGACAAGGTGCTGTCCGCGCGCGACCGCTCGCTGTCGCGCGAGAAGTACCTGTACGAGCAGCTGCTGG
ATACCCTTGGCGCGCAGCTGGAACCGCTGAAGCAGTGCGCCGCCGCACTGAGCGAACTGGATGTGCTGGCAGCCTTCGCC
GAACGCGCGCAGGCGCTGGACTGGGCGCGCCCGGAGCTGCAGGCCGAGCCCTGCCTGAAAATTGAGCGTGGCCGCCATCC
GGTGGTCGAGGCGGTGCGCGAGCAGCCGTTCGAACCGAACGACCTGGACCTGCATCCGGACCGGCGCATGCTGGTCATCA
CCGGCCCGAACATGGGCGGTAAATCGACCTACATGCGGCAGAACGCGCTGATCGTGCTGCTGGCACACATCGGCAGCTTC
GTGCCGGCCAGCCGTGCGCTGATCGGCCCGATCGACCGCATCCTGACCCGCATCGGCGCCGGTGACGACCTCGCCCGCGG
GCAGTCGACCTTCATGGTCGAGATGGCCGAGACCAGCTACATCCTGCATCACGCCACCGCGCATTCGCTGGTGCTGATGG
ACGAGATCGGCCGCGGCACGTCCACCTACGATGGCCTGGCGCTGGCCGACGCGGTGGCCCGCCACCTGGCCTACCAGAAC
CGCTGCTACACGCTGTTCGCCACCCACTACTTCGAGCTGACCGCGCTGGCCGACGAGCAGCACGAGGGCGGCCGCAGCGG
CATCGCCAACGTGCACCTGGATGCCGTCGAGCACGGTGAAGCACTGGTGTTCATGCACGCGGTGAAGGACGGCCCGGCCA
ACCGCAGCTTCGGCCTGCAGGTGGCCGCACTGGCCGGCCTGCCGCGCGCCACCGTGGCGCAGGCGCGTCGTCGCCTGGCC
GAGCTGGAGCAGCGCGGAGGTGAGAGCCATGCCGCCAAGCTCGCGCCGCAGGCACTGGATGCGCCGCAGCAGTTCGGCCT
GTTCAGTGCGCCGGCCAGCAAGGCGCAGGAAGCACTGGCAGCAATCGACCCGGACGAATTGACGCCGAAGCAGGCGCTGG
AAGCCCTGTACCGGTTGAAGGCGCTGCTGTAA

Protein sequence :
MSKEKSAEHTPLMKQFFAAKSDYPDLLLFFRMGDFYELFYDDARKAARLLDITLTQRGSSGGAPIPMAGVPVHAYEGYLA
RLVALGESVAICEQIGDPALAKGLVERKVVRIVTPGTVTDEALLDERRDTLLMALSRTKQGYGLAWADLAGGRFLVNEVE
TDDALEAELARLEPAELLVPDEENWPDFLRQRTGVRRRAPWLFDADSGRRQLLNFFKLHDLSGFGIDDKPRATAAAGALL
GYVEETQKQRLPHLTSIAMETAGEAIAMNAATRRHLELDTRVDGDTRNTLLGVLDSTVTPMGGRLLRRWLHRPLRLREVL
VQRHHAVETLIDRGSDADIREQFRRLGDLERILTRVALRSARPRDFSTLRDGLGLLPAVREVLAPLDSPRLQALHAALGE
HDECAQLLASAIAEMPPLKLSDGGVLADGFDEELDELRRLSTHADQFLVDLEQRERESSGIPTLKVGYNRVHGYYIEISK
GQSDRAPVHYTRRQTLTNAERYITEELKAFEDKVLSARDRSLSREKYLYEQLLDTLGAQLEPLKQCAAALSELDVLAAFA
ERAQALDWARPELQAEPCLKIERGRHPVVEAVREQPFEPNDLDLHPDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSF
VPASRALIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATAHSLVLMDEIGRGTSTYDGLALADAVARHLAYQN
RCYTLFATHYFELTALADEQHEGGRSGIANVHLDAVEHGEALVFMHAVKDGPANRSFGLQVAALAGLPRATVAQARRRLA
ELEQRGGESHAAKLAPQALDAPQQFGLFSAPASKAQEALAAIDPDELTPKQALEALYRLKALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BurJV3_1151 YP_004791709.1 DNA mismatch repair protein mutS VFG0562 Protein 0.0 55