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Name : lysS (MPUT_0040) Accession : YP_004789951.1 Strain : Mycoplasma putrefaciens KS1 Genome accession: NC_015946 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 49496 - 50998 bp Length : 1503 bp Strand : + Note : Identified by match to HMM PF00152.14; identified by match to HMM TIGR00499. DNA sequence : ATGATAAGTGGTAGAAAATTTACTGAACAAGAATTAGTTAGAAGACAAAAGCATGCCGATTTAGTAAGTAAAAACAAAGA TCCATACAAAATTACTAAGTTTAAAAGAACTAATTCATTAAAAGAATTAAACACTAAGTTTGAAAAATATTCAAAAGAAG AATTATTATCAAAAGATCAAGAAATTATTAGTGTTGCTGGAAGAATTAAATTGTATCGTGAAGCAGGAAAAAAGGCGGTT TTTGTAAATATTGATGATCAAGATTCAAGCATCCAATTATATGTTAGACAAGATGAAATTGGCGAAGAGTTATTTGCAGA TTTTAGAAATTTAGATCTAGGAGATATCATTGGTGTTGAAGGTGTGATGATGAGAACTGATCACGGCCAATTATCAATTA GATGTAAAAAAGTAATTTTATTATCTAAAGCTTTAAGACCACTTCCAGATAAGCACGCAGGAATTCAAGATATTGAAGAA AAATATCGTAGAAGATATGTTGATCTAATTATGAATCATGAAGTTAGAAAGATATTTCAATCTAGAACAAAAATAATTAG AACTTTACAAAATTTTTTAGATCAAAAAGGATATATCGAAGTTGAAACCCCAATTTTACATTCATTAAAAGGTGGAGCTG CAGCTAAACCATTTATCACTCATTACAATGCACTAGATATTGATGTTTATTTAAGAATTGCTACAGAATTACACTTAAAA CGTTTGATAATTGGTGGATTTGAAGGTGTTTATGAAATCGGAAGAATTTTTAGAAACGAAGGAATGAGCACAAGACATAA CCCGGAATTTACAAGTATTGAATTGTATGTTGCTTATGAAGATATGTTCTTTTTAATGGATTTAACTGAGCAAATCTTTA GAGTATGTAATGCTAGTGTAAATGACTCACCAATCATTAAATATGGAGATGTTAGTTTAGATTTGTCTAAGCCTTTTAAA AGATTGCATATGGTTGATGGGATTAAAGAAATTACAGGTATTGATTTTTGACAACCAATGAGTGTTAATCAAGCATTAAG TTTAGCAAAACAACATAACATCCATGTTGAAAAACACCAAGAAAGTGTTGGACATATTATTAACTTATTTTTTGAAGAAT TTGTTGAATCTAGCATTGTTGAGCCAACCTTTGTTTATGGTCATCCAAAAGAAATTTCACCATTAGCAAAATTAAACTTT GAAGATCCAAGATTTACTGATCGATTTGAATTATTTATTATTGGTCGCGAGTATGCCAATGCTTTTAGTGAACTAAACGA TCCAATTGATCAATACGAAAGATTTAAAGTTCAAATAAAAGAAGAAGCACAAGGAAATAGTGAAGCAACAGATATGGATC TTGATTTTATTGAAGCTTTGGAACATGCCATGCCACCAACTGCAGGAATTGGGATTGGAATTGACAGATTAGTTATGTTA CTAACAAATAGCGAATCAATTAAAGATGTTTTATTATTTCCACAAATGAAACCAAGAGATTAA Protein sequence : MISGRKFTEQELVRRQKHADLVSKNKDPYKITKFKRTNSLKELNTKFEKYSKEELLSKDQEIISVAGRIKLYREAGKKAV FVNIDDQDSSIQLYVRQDEIGEELFADFRNLDLGDIIGVEGVMMRTDHGQLSIRCKKVILLSKALRPLPDKHAGIQDIEE KYRRRYVDLIMNHEVRKIFQSRTKIIRTLQNFLDQKGYIEVETPILHSLKGGAAAKPFITHYNALDIDVYLRIATELHLK RLIIGGFEGVYEIGRIFRNEGMSTRHNPEFTSIELYVAYEDMFFLMDLTEQIFRVCNASVNDSPIIKYGDVSLDLSKPFK RLHMVDGIKEITGIDFWQPMSVNQALSLAKQHNIHVEKHQESVGHIINLFFEEFVESSIVEPTFVYGHPKEISPLAKLNF EDPRFTDRFELFIIGREYANAFSELNDPIDQYERFKVQIKEEAQGNSEATDMDLDFIEALEHAMPPTAGIGIGIDRLVML LTNSESIKDVLLFPQMKPRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-96 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004789951.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-97 | 46 |
