Gene Information

Name : fepC (HAH_5011)
Accession : YP_004786129.1
Strain :
Genome accession: NC_015944
Putative virulence/resistance : Virulence
Product : iron/cobalamin ABC-type transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 13210 - 14169 bp
Length : 960 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTGACGGTCGGCCCTCACAGATGGACGGAGAGACAGTCGAACACAGGTCCGAGGCCGGAACACGAGCCGTCGATAG
CGCCGGTGAAACGACATCGGAGTCGGCCGCAGAAATCGACGGGACCGATCTCGTTGTCGGGTACTCTGGACGGGACGAGC
CTGTCATCGACGGCGAGTCGATCGCCGTCCCACCGGACGAAGTGACCGCGCTCATCGGCCCCAACGGGAGCGGGAAGAGC
ACGCTCCTGAAAGCGATGGCGGACAAGATTTCGCCCGACGACGGAACCGTCTTTGTCGATGGCCAGACGATCGACGAGTT
CGGGTCCAAGGAACTCGCACGCAAACTCGGCTTGCTCTCCCAGGAGAACGTCGTTCCGACCGGTATCTCGGTGGGTGATC
TGGTCGAGCGCGGACGGTACCCACATACTGGGTTCTTCGAGTCGCTGTCCGACGAGGACCGAGCCGCCGTCGACGACGCG
ATTCAACTTGCCGGCATTGAGAACCTCCGTGACCGCGATGTCGACAGCCTGAGCGGCGGCCAGAAGCAACTCGTCTGGAT
TGCGATGGCAATCGCTCAGGACACGGACGTGTTGCTGTTGGACGAGCCGACGACGTTCCTCGACCCACAGCACCAGCTGG
AAGTGATGCAGATAGTCGAAACGCTCCGGGATGAGAGTCAGATAACGGTCGTCCTCGTACTCCACGATATCGCACAGGCA
GCGCGGTACGCCGACAACATCGTCGCACTCAAGGACGGCTCGATGTACGCCCGCGGCCCGCCAGAGGAGGTGGTCACGAA
ACAGTTGCTTGCTGACGTCTTCGAGATCGAAGCGGCGGTTCTGGAAACCGAGTATGGGCTTCAGGTGATTCCAATTGACC
CGGTCACCGACGCGCAGGCGGCACACACCACTGTTGGTCCTGTTCCCGAGGACGTTCCGGATACTGATCGGGAACCGTGA

Protein sequence : 
MADGRPSQMDGETVEHRSEAGTRAVDSAGETTSESAAEIDGTDLVVGYSGRDEPVIDGESIAVPPDEVTALIGPNGSGKS
TLLKAMADKISPDDGTVFVDGQTIDEFGSKELARKLGLLSQENVVPTGISVGDLVERGRYPHTGFFESLSDEDRAAVDDA
IQLAGIENLRDRDVDSLSGGQKQLVWIAMAIAQDTDVLLLDEPTTFLDPQHQLEVMQIVETLRDESQITVVLVLHDIAQA
ARYADNIVALKDGSMYARGPPEEVVTKQLLADVFEIEAAVLETEYGLQVIPIDPVTDAQAAHTTVGPVPEDVPDTDREP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-53 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-48 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-52 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-53 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-53 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-53 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_004786129.1 iron/cobalamin ABC-type transporter ATP-binding protein BAC0164 Protein 4e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_004786129.1 iron/cobalamin ABC-type transporter ATP-binding protein VFG1042 Protein 4e-48 45
fepC YP_004786129.1 iron/cobalamin ABC-type transporter ATP-binding protein VFG0925 Protein 1e-55 43