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Name : Acife_0926 (Acife_0926) Accession : YP_004783424.1 Strain : Acidithiobacillus ferrivorans SS3 Genome accession: NC_015942 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 954846 - 956336 bp Length : 1491 bp Strand : + Note : TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: afr:AFE_0480 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type DNA sequence : ATGGTGGATCAGGAACTCAATGACCAGATGCAGGTGCGGCGTGACAAGCTGGGACACTGGCGTAGCGAAGGCCATGCCTA TCCCAACGGCTTCCGTCGCGATGCCTTGGCGGGCGACTTGCAACAGCGTTATGGCGATATGGATGCCACGGCCCTGGAGC AGGAGCCCATCGCGGCGCGGCTCGGCGGGCGACTGATGAGCCGCCGGGTCATGGGTAAAGCCAGTTTCGCCGACATTCAG GATCAGTCCGGGCGTATTCAACTCTTTGTCAGCCGCGATAACCTGGGCGAAGAGGCCTACGCGCGCTTCAAGGGCCTGGA TTTCGGCGACATCATCGGTGTGGATGGTGTCCTGTTCCGCACCAAGACCGGGGAGCTTTCGGTTAAAGTGCATAAGCTCC AACTGCTGAGCAAGGCCCTGCGCCCGCTGCCGGAAAAATGGCACGGACTCGCCGACCCGGAAACCCGTTTCCGCCAGCGC TATGTCGATCTGATCGTCACCGAAGCCACCCGCCGCACCTTCCAGATTCGTGCCGAAACGGTGGCAGCCCTGCGCGATGG TCTGCGCCAGCGCGGCTTTTATGAGGCGGAGACGCCCATGATGCAGCCTATCCCCGGCGGCGCCACGGCGCGGCCCTTTG TTACCCATCACCATGCCCTGGATATGACCCTCTACCTGCGTATCGCCCCGGAGTTGTACCTCAAGCGACTGGTGGTGGGC GGCATTGAGCAGGTTTTTGAAATCAACCGCAACTTCCGCAATGAAGGCATTTCCACCCGCCATAACCCCGAGTTCACCAT GCTCGAATGGTACGAGGCCTACGCCGACCACGTGCGCGCCATGGACCTTACCGAGACCCTGATCCGTGCTGCGGCACAGG CGTCCTTGGGCACGACGGCGATAAACTACCAAGGGCTGGAGATTGACCTCGGCAAACCCTTCCACCGTTTAACGGTGACG GAGTCAGTGCGTGCCCATAACCCCGATCTGGCGGATGCCGATCTGCGGGACCCCGCAGTGCTGGCGGCCAAGCTCGCGCA GTTACAGCTGCCCTGTCAACCCGCCTGGGGCTGGGGCAAGCGTCTTATCGAAATCTTCGAGAAGACAGTGGAAGGCCATC TCCAGCAGCCGACCTTCATCACCGAGTATCCCCTGGAAGTCAGTCCGCTGGCGCGCCGTAATGATCTCGACCCCGAGGTC ACGGATCGTTTCGAGCTGATGATCGCCGGCCGCGAGCTGGCCAACGGTTTCTCCGAGTTGAATGATCCCGAAGATCAGGC CGCCCGCTTCCGGGCGCAGGTGGCGGCGAAGGACGCCGGTGATGAAGAGGCGATGTGCTTCGATGCCGACTATATTCGCG CCCTGGAATACGGCATGCCGCCGACGGCAGGGGTGGGGCTGGGCATCGACCGTCTGGTCATGCTGCTCGCCGATCAGCCC AGCATTCGCGAGGTGATTCTCTTTCCCCATCTGCGGCCGGAGCAGTCATGA Protein sequence : MVDQELNDQMQVRRDKLGHWRSEGHAYPNGFRRDALAGDLQQRYGDMDATALEQEPIAARLGGRLMSRRVMGKASFADIQ DQSGRIQLFVSRDNLGEEAYARFKGLDFGDIIGVDGVLFRTKTGELSVKVHKLQLLSKALRPLPEKWHGLADPETRFRQR YVDLIVTEATRRTFQIRAETVAALRDGLRQRGFYEAETPMMQPIPGGATARPFVTHHHALDMTLYLRIAPELYLKRLVVG GIEQVFEINRNFRNEGISTRHNPEFTMLEWYEAYADHVRAMDLTETLIRAAAQASLGTTAINYQGLEIDLGKPFHRLTVT ESVRAHNPDLADADLRDPAVLAAKLAQLQLPCQPAWGWGKRLIEIFEKTVEGHLQQPTFITEYPLEVSPLARRNDLDPEV TDRFELMIAGRELANGFSELNDPEDQAARFRAQVAAKDAGDEEAMCFDADYIRALEYGMPPTAGVGLGIDRLVMLLADQP SIREVILFPHLRPEQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-129 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acife_0926 | YP_004783424.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 2e-129 | 55 |
