Gene Information

Name : Acife_0883 (Acife_0883)
Accession : YP_004783390.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : DEAD-like helicase
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 907316 - 909415 bp
Length : 2100 bp
Strand : +
Note : SMART: DEAD-like helicase, N-terminal; KEGG: afe:Lferr_1285 YeeB-like protein

DNA sequence :
ATGACCAACCCCACCAACGCCTACACCGTGCCATCGGTATCCATCACCACGGCGCGCACCGGGGTGTCCAGCAAGGCCAA
CGTGCTGGGCATGCGCGCCATGCAGGAGCGCGCCTATGCGAAGCGCGGCGAGCAGTATCTACTGATCAAATCGCCACCGG
CATCGGGCAAATCCCGAGCGCTGATGTTCATTGCCTTGGACAAACTCAACAACCAGGGCTTGCAGCAGGCCATTGTTGTG
GTGCCGGAACGATCCATCGGCGGCAGCTTTGCCGACGAGCCTCTGAGCCGGTACGGTTTCTTTTGGGATTGGCGGGTGGC
CCCACAGTGGAACCTGTGCAACGCCCCCGGCATAGACGAGTCGCGCGTGGCCAAGTCCAAGGTGGACGCGGTGCGCAAGT
TTTTGAAAAGTACCGACAAGGCGCTGGTCTGCACCCACGCCACCTTCCGCTTTGCGGTGGAAGAGCTGGGCATCGAAGCG
TTTGATAACCGTCTGATCGCCATTGACGAGTTCCACCACGTCTCCAACAACCCGGACAACAAGCTGGGCAGTCAGCTCGG
TGCGTTCATCGCTCGTGACAAGGTGCATCTGGTGGCCATGACGGGCTCCTACTTCCGTGGCGACAGTGAGGCTGTGTTGG
GTCCTGCGGATGAGGCCAGATTCGAGACAATCACCTATACCTACTATGAGCAGCTCAATGGCTACAGCTGGCTCAAGTCG
TTGGACATCGGCTACTTCTTCTATACGGGCCGGTACGTGGACGCCGTTGCGAAGGTGCTGGACCCGGCACTCAAGACCAT
CGCTCACATCCCCAACGTCAACTCGCGCGAGAGCCTGCAAGACAAGGAACGCGAAGTGAATGAGATCATGCAGGCGCTGG
GCGAATGGAAGGGCATTGATCCGGCCACCGGCTTCCACCAGATACAAACCAAGGACGGCCGCACGCTGAAGGTGGCAGAC
CTCGTGGACGACAGCGACCCGGCCAGACGTTCCCGCGTGCTGGCGGCACTGAAAGACCCGGCGCAAAAGAACAACCGCGA
CCATGTAGACGTCATCATCGCGCTGGGCATGGCGAAAGAAGGGTTCGATTGGATCTGGTGCGAACATGCACTGACCATAG
GCTACCGCAGCAGCCTGACTGAAATCGTGCAGATTATTGGCCGCGCCACCCGCGATGCCGAGGGCAAGGAACGGGCGCGC
TTCACTAATCTGATTGCTGAACCCGCAGCGGAACAAGCTGCTGTGGCCGAAGCAGTGAACGATCTACTCAAAGCTATTTC
CGCCAGCCTGCTGATGGAACAGGTGCTGGCCCCGCGATATGAGTTCACGCCGAAAAACAACGGCCCGAAGGAAGGTTTTG
ATTACGGGGCAGGTGGCTATCAGATTGGCCGCAGCAATGTAGGCGTGAATGAAAGCACCGGCCAGTACCACGTGGAGATC
AATGGGCTGACCACGCCGCAAAGCCCGGAGGCTACGCGCATCTGCAAGGAGGACTTGAACGAAGTCGTCACCAGCTTCTT
GCAGGACAAGACGGTGCTGGAGCGCGGCCTCTTCGACCAGGAAAACACCTTGCCCGAAGAACTCACCCAGTTGCACATGG
GCAAAATTGTGCGCGAGCGTTACCCGGAATTGAACGGGGCCGATCAGGAGGCCATTCGTCAACATGCCATCGCTGCCATG
AACATCACCCAACAGGCCAAGTTGGCGTTAGCCCAGGCCGATGCCGAAGGCGCAACTCAAGGCAATACGGCCTTGCTGGA
TGGGGTGCGCAAGTTCGTCAATGTGCGCGACCTGGACATTGACCTGATCGACCGCATCAACCCCTTCGATGCCGCCTATG
CGGTGCTGGCGAAAGCGATGGATGAGAAATCGTTGCGCCAGGTTCAGGACAGCATTGCCGCCAAGAAGGTGAGCATTCCC
GAAGACGAAGCCCGCGAGCTGGCAAAACGCGCCCTGCTGTTCAAGAATGAGCGTGGCCGCCGGCCAGACATCCACTCCGC
TGACGCATGGGAGAAACGCATGGCCGAAGGCGTGGCCGCGCTGACGCGTTATGTGCAAGCTAAGGCAGCACGAGCGCAAG
GAGAATCCAGCAATGGTTGA

Protein sequence :
MTNPTNAYTVPSVSITTARTGVSSKANVLGMRAMQERAYAKRGEQYLLIKSPPASGKSRALMFIALDKLNNQGLQQAIVV
VPERSIGGSFADEPLSRYGFFWDWRVAPQWNLCNAPGIDESRVAKSKVDAVRKFLKSTDKALVCTHATFRFAVEELGIEA
FDNRLIAIDEFHHVSNNPDNKLGSQLGAFIARDKVHLVAMTGSYFRGDSEAVLGPADEARFETITYTYYEQLNGYSWLKS
LDIGYFFYTGRYVDAVAKVLDPALKTIAHIPNVNSRESLQDKEREVNEIMQALGEWKGIDPATGFHQIQTKDGRTLKVAD
LVDDSDPARRSRVLAALKDPAQKNNRDHVDVIIALGMAKEGFDWIWCEHALTIGYRSSLTEIVQIIGRATRDAEGKERAR
FTNLIAEPAAEQAAVAEAVNDLLKAISASLLMEQVLAPRYEFTPKNNGPKEGFDYGAGGYQIGRSNVGVNESTGQYHVEI
NGLTTPQSPEATRICKEDLNEVVTSFLQDKTVLERGLFDQENTLPEELTQLHMGKIVRERYPELNGADQEAIRQHAIAAM
NITQQAKLALAQADAEGATQGNTALLDGVRKFVNVRDLDIDLIDRINPFDAAYAVLAKAMDEKSLRQVQDSIAAKKVSIP
EDEARELAKRALLFKNERGRRPDIHSADAWEKRMAEGVAALTRYVQAKAARAQGESSNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDPW8_0255 YP_005141822.1 putative ATP-dependent helicase Not tested Not named Protein 2e-90 45