Gene Information

Name : Acife_0807 (Acife_0807)
Accession : YP_004783322.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 819854 - 821920 bp
Length : 2067 bp
Strand : -
Note : KEGG: afr:AFE_2439 copper-translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; Hal

DNA sequence :
ATGGACCATTCAGGACATCAGGAACACGAGATAGAAACCGCCCACCCCGATTTCCACGCCCATATGCACCCCGCCGCTCT
TGGCCACGCCGGGATGCATGGCGGTCATGACCATGGTGCCATGATCGCCGATTTTCGGCGGCGGTTCTGGGTATCGCTGG
TGCTGACGATCCCTATCCTCCTTTTGTCGCCGCTTATCCAGCATCTGCTGGGGCTGGAGGCTGCTCTCGCCTTTACGGGG
TCGTCCTATGTGCTTTTCGCGCTATCGAGCGGGGTGTATTTCTACGGCGGTTGGCCCTTCCTGAAGGGGCTGTTTGCCGA
GCTCGAAACCCGCAAGCCAGCCATGATGACGCTGATCGCCCTGGCCATCAGCGTGGCCTATTTTTACTCGAGTGCCGTCG
TGTTCGGGGTTCAGGGTGAAGTGTTCTTCTGGGAACTTGCCACGCTGATCGATGTGATGCTGCTCGGCCACTGGATCGAG
ATGAAATCGGTCATGGGGGCTTCCGGCGCACTGGAAAAACTGGTGCAAATGATGCCATCCGAGGCCCATCTCGTCACCCC
GGAGGGCATGAAAGACGTGCCGGTCGCCAATCTGCAGCGCGGTGACCGGGTGCTGGTGAAGCCCGGCGAAAAAATTCCTA
CGGACGGGCGTATCGTCGAAGGGCGAACCACCGTCAATCAGGCCATGCTCACCGGCGAAAGCCAGCCCGTGGAGAAGGGG
GACGGCGACGAAGTTATCGGCGGTTCGGTTAACGGCGAGTCGAGTATCACCGTCGAGGTCCACAAGACCGGCAGTGAAAC
CTATCTTGCACAGGTCATCGAGATGGTGCGCCGGGCGCAGGAGTCCCGCTCCCGGACTCAGGACCTGGCCGACCGCGCGG
CCCTGGTGCTGACCCTTACCGCGTTGAGCGTCGGGGGGCTTACCCTTGCCATTTGGCTGGTCCTTGGCCAGCACTTCGAG
TTTGCCCTGGCCCGCATGGTGACCGTCATGGTGATTGCCTGTCCCCATGCCCTGGGCCTGGCGATTCCGCTGGTCGTTGC
CGTGTCCACCGCCATGGCGGCGCAGCATGGGCTGCTTATCCGGGACCGGTCTGCTTTTGAGCGGGCGCGCCAACTGCAGG
CGGTAGTGTTCGACAAGACCGGGACCTTGACGGAGGGACGGTTTGGCGTCACGGATGTGGTCGTGCTGGGCGGATACGCC
GAAGATCAGGTCGTACGGCTTGCCGCGGCCCTCGAAAGCCAGTCGGAGCACCCCATCGCCGCCGGCATCGTGGCATATGC
CAAAGCGAAGGACATCGGCTTCGAGCCTCCCAAGGAATTCAAGGCCATCCCCGGCAAGGGCGCACAAGCCGTTGTAAATG
GCCGCAATGTGAAAGTTGTAAGCCCCGGCTATCTCAAGGAGCATGGCCTTGATGTCAGCGATGAGCGGATCGCGGCCTTG
GCATCCCAGGGCAAAACGGTGATATACCTGCTCGTCGACGAAAAACCAGCGGGGGCTGTCGCGCTGGCCGACATCATTCG
AGCGGAGTCGCGGGAAGCCCTAGCACGGCTGAAGGGGATGGGCGTGCAGGTGATGATGCTGACCGGCGACTCGGAAGCGG
TGGCCCGCTGGGTGGCCCAGGAAATGGGGCTGGACGACTATTTCGCCGAAGTGCTCCCTGGACAAAAGGCGGAGAAGATC
AAGGAGGTAAAGGCGCGGGGATTGCGCGTGGCCATGGTCGGCGACGGTGTCAACGACGCGCCCGCCCTGGTGGAGGCGGA
CGTCGGGATCGCCATCGGGGCGGGCACGGACGTCGCCATCGAGTCGGCGGACATCGTGCTGGTCCGCTCCGATCCCCGAG
ACGTGGTGGCCATCCTGGAACTTTCCCGGGCGACCTATCGCAAGATGATCCAGAACCTGTGGTGGGGTGCCGGCTACAAT
ATCGTGGCGATCCCTCTTGCTGCCGGGGTTGCTTACAGCGTTGGCCTGGTGCTTTCCCCGGCGGTGGGGGCGGCCCTGAT
GTCCGTTTCCACGGTGATCGTCGCCATCAACGCCAAGCTCCTCCAGAGGGTTCGGCTCACCGCATAG

Protein sequence :
MDHSGHQEHEIETAHPDFHAHMHPAALGHAGMHGGHDHGAMIADFRRRFWVSLVLTIPILLLSPLIQHLLGLEAALAFTG
SSYVLFALSSGVYFYGGWPFLKGLFAELETRKPAMMTLIALAISVAYFYSSAVVFGVQGEVFFWELATLIDVMLLGHWIE
MKSVMGASGALEKLVQMMPSEAHLVTPEGMKDVPVANLQRGDRVLVKPGEKIPTDGRIVEGRTTVNQAMLTGESQPVEKG
DGDEVIGGSVNGESSITVEVHKTGSETYLAQVIEMVRRAQESRSRTQDLADRAALVLTLTALSVGGLTLAIWLVLGQHFE
FALARMVTVMVIACPHALGLAIPLVVAVSTAMAAQHGLLIRDRSAFERARQLQAVVFDKTGTLTEGRFGVTDVVVLGGYA
EDQVVRLAAALESQSEHPIAAGIVAYAKAKDIGFEPPKEFKAIPGKGAQAVVNGRNVKVVSPGYLKEHGLDVSDERIAAL
ASQGKTVIYLLVDEKPAGAVALADIIRAESREALARLKGMGVQVMMLTGDSEAVARWVAQEMGLDDYFAEVLPGQKAEKI
KEVKARGLRVAMVGDGVNDAPALVEADVGIAIGAGTDVAIESADIVLVRSDPRDVVAILELSRATYRKMIQNLWWGAGYN
IVAIPLAAGVAYSVGLVLSPAVGAALMSVSTVIVAINAKLLQRVRLTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 4e-108 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acife_0807 YP_004783322.1 copper-translocating P-type ATPase BAC0629 Protein 0.0 67
Acife_0807 YP_004783322.1 copper-translocating P-type ATPase BAC0079 Protein 7e-134 47
Acife_0807 YP_004783322.1 copper-translocating P-type ATPase BAC0383 Protein 3e-103 44
Acife_0807 YP_004783322.1 copper-translocating P-type ATPase BAC0101 Protein 2e-87 42