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Name : Acife_0682 (Acife_0682) Accession : YP_004783210.1 Strain : Acidithiobacillus ferrivorans SS3 Genome accession: NC_015942 Putative virulence/resistance : Virulence Product : two component sigma-54 specific Fis family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 700287 - 701717 bp Length : 1431 bp Strand : - Note : KEGG: afr:AFE_0447 sigma-54 dependent DNA-binding response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, re DNA sequence : ATGCCGAAAAATCTCTTGACCACCACGTTCTCAAGCGGCCCTAAGATGCCCAAACCTATCCCCACCATTCTCACCATTGA CGACGATCCCGACTTTCTGCGCCTGCTCGGCCTCTGGCTGGAAAGTGAGGGATACCGTGTTCTGGCGAGCAGTGATCCTG CCCAAGGCATGCAGATTTTGCACACGGACAAGCCCGATCTGGTCATCACCGATCTGCGCATGCCGGGCATGGATGGGATG GCCGTGCTCGAGGCGGTGCAAGCGCTTGACCCCGATCTGCCGGTCATTCTGCTCACCGCCCATGGCAGCATCCCCAACGC GGTAGCGGCCATGCGTGCGCAGGCATTCGGGTACCTGAGCAAACCCTTCAGCAACGAAGAACTCCAAGAACTGACCAAAG CCGCCCTTGTGCAGCGCCATGCCAGTCAGGAAACCCGCAAACTCCGGACAGCTTTGCGTGAACAGGCGGGGCAGAGCATT CTCCACCGCAGCCCAGCCATGGCCGCGCTGGTGGACGAATTGGCGCGGATCGCCAGTTCGAAAGCCAGCGTTTTCCTTTC CGGAGAAAGCGGCTCCGGCAAGGAACGTGTCGCTCGCGCCATCCACGCTGCCAGCCCGCGCTGTGACGGTCCATTCATTG CGGTCAATTGCGGCGCCATACCCGCCGAGCTGGCGGAGAGTGAGCTCTTCGGCCATGTCAAAGGTGCCTTCACTGGCGCC ACTCAAGACCATGTCGGATTAATCCGCAGCGCCAACAACGGTACCCTCTTCCTGGATGAAATTGCCGATTTACCTCTTAC CCTGCAGGTTAAATTGCTCCGCGTCCTTCAGGAAGGCAGCCTGCGTCCCGTCGGCGCAAAAACAGAGATGACTGTCGACC TGCGAGTCATCAGCGCTACCCATCAGGATATTCATGCCCTTACCGCCAGTGGTGCCTTCCGCGAGGACCTTTACTATCGC CTGCATGTCATCCCGCTGCGGGTTCCCAGCCTGAGTGAAAGAGCGGAAGATATTCTCCTGCTGGCCCAGCACTTTCTTGA TCGGGAAAGTCAGCGACTGAAGCGGGATATTCTGGGCTTCAGCCCCGAAGCCCTCGACAAACTGATGCAACGATCCTGGC CCGGCAATGTCCGGGAATTGGAGAATGTCGTCACTTTTGCCGCGGCGGTCACTGAAAAAGGCTGGGTCGCTGCCGACACC ATTCCCGACACAGGTCGCCAAGGTGGACAGAGTGCTTTTCCACCCCTGCAAGATGCCAAGGCTGCCTTTGAGCGTGCCTA TCTGGAAAACCTGTTGCGCGCTACGGATGGCAACATCTCCCGTGCCGCGCGCATAGCTGGCCGACATCGGACTGATCTTT ACAAATTGATGCGCAAACACAGTTTGGCTCCGCAGCTTTTCAAGGGTCAGGAGGACCGGGATGAAGAATAG Protein sequence : MPKNLLTTTFSSGPKMPKPIPTILTIDDDPDFLRLLGLWLESEGYRVLASSDPAQGMQILHTDKPDLVITDLRMPGMDGM AVLEAVQALDPDLPVILLTAHGSIPNAVAAMRAQAFGYLSKPFSNEELQELTKAALVQRHASQETRKLRTALREQAGQSI LHRSPAMAALVDELARIASSKASVFLSGESGSGKERVARAIHAASPRCDGPFIAVNCGAIPAELAESELFGHVKGAFTGA TQDHVGLIRSANNGTLFLDEIADLPLTLQVKLLRVLQEGSLRPVGAKTEMTVDLRVISATHQDIHALTASGAFREDLYYR LHVIPLRVPSLSERAEDILLLAQHFLDRESQRLKRDILGFSPEALDKLMQRSWPGNVRELENVVTFAAAVTEKGWVAADT IPDTGRQGGQSAFPPLQDAKAAFERAYLENLLRATDGNISRAARIAGRHRTDLYKLMRKHSLAPQLFKGQEDRDEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 2e-63 | 44 |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 2e-63 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acife_0682 | YP_004783210.1 | two component sigma-54 specific Fis family transcriptional regulator | BAC0467 | Protein | 3e-70 | 45 |
| Acife_0682 | YP_004783210.1 | two component sigma-54 specific Fis family transcriptional regulator | BAC0089 | Protein | 2e-87 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acife_0682 | YP_004783210.1 | two component sigma-54 specific Fis family transcriptional regulator | VFG1249 | Protein | 5e-62 | 45 |
| Acife_0682 | YP_004783210.1 | two component sigma-54 specific Fis family transcriptional regulator | VFG1214 | Protein | 4e-68 | 42 |
