Gene Information

Name : Acife_0561 (Acife_0561)
Accession : YP_004783093.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : ATP-dependent hsl protease ATP-binding subunit hslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 570325 - 571653 bp
Length : 1329 bp
Strand : -
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: afr:AFE_2748 heat shock protein HslVU, ATPase subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2

DNA sequence :
ATGAGCATGTCTGAAATGACCCCCCGCGAGATCGTCCAGGAGCTGGACAAGTACATCATCGGCCAATCCGAAGCCAAGCG
TGCCGTGGCTATTGCCCTGCGCAACCGCTGGCGACGCGGGCAGGTGCCGCCGCCACTGCATCAGGAAATCACTCCCAAAA
ACATCCTGATGATCGGGCCCACAGGGGTAGGCAAAACGGAAATCGCCCGGCGTCTGGCGCAACTCGCCAACGCCCCATTC
ATCAAGGTAGAAGCCACCAAGTTCACCGAAGTCGGCTACGTGGGTAAGGATGTGGAATCCATCATCCGCGATCTGACCGA
AACCGCTGTAGATATGATCCGCAGCGAACGTCAGGTCGCGCTGCGCCAGCGTGCTGAGGAGCTGGCCGAGGAGCGGATCA
TCGACATCCTCATCCCCGGCCCCCGCGACAGCACTGTGCCACGCAGCGATGAGGGTACACGCCAGAAGTTTCGCAAAATG
CTGCGTGAAGGCAAGCTGGACGCGCAGGAAATTGAGATCGAAGTGAGTGCGCCCAAGGGGGGTGTAGAGATCATGGCCCC
GGCGGGCATGGAAGAAATGACTAACCAGCTCCGCGATATGTTCTCTAACATGGCACCAGGCAAAACCAGCACGCGACGCG
TCACCGTTAGCGAAGCGCAGCGTCTGTTGACGGACGATGAAGCCGCCAAGCTGGTCAATGAAGAGGAAGTCCGCGCCCTG
GCGCTGGAGCGGGTGCAATCCGGCGGCATTGTCTTCATTGATGAGATCGACAAGGTGGCAGTGCGCGCTGGCACTCAGCA
GGGCTCGGACGTCTCCCGGGAAGGCGTGCAGCGAGATTTGTTGCCACTGGTAGAAGGCTCCAATGTGAGCACCCGTTACG
GCGTGGTGAAGACCGACCACATTCTCTTCATCGCCTCTGGTGCCTTCCACCTCAGTAAGCCCTCAGACCTAATTCCAGAG
CTGCAAGGCCGCCTGCCTATTCGCGTGGAGCTGGAAGCCCTCAGTGCGGCAGATTTGGTACGCATACTGCAGGAGCCGGA
GAATGCGCTGGTCCGGCAGTACAGTGCCTTGCTGGCCAGCGACGGGGTGACTTTGCACTTTACTCAGGAGGGTGTGCAGC
GCATTGCCGAGATTGCCCAGCAGGTCAACGAGCGTGTGGAGAACATCGGAGCTCGGCGATTACACACCGTCATGGAGCGG
TTGCTGGAAGAGGTGGCTTTTATCGCGCCGGACGGCGGCACTACGGCTCTGGAGGTCGACGCTGCCTACGTGGACAGCCG
CCTGAAAGATCTGGCACAGGACGAGGATTTGTCCCGCTATATTTTGTGA

Protein sequence :
MSMSEMTPREIVQELDKYIIGQSEAKRAVAIALRNRWRRGQVPPPLHQEITPKNILMIGPTGVGKTEIARRLAQLANAPF
IKVEATKFTEVGYVGKDVESIIRDLTETAVDMIRSERQVALRQRAEELAEERIIDILIPGPRDSTVPRSDEGTRQKFRKM
LREGKLDAQEIEIEVSAPKGGVEIMAPAGMEEMTNQLRDMFSNMAPGKTSTRRVTVSEAQRLLTDDEAAKLVNEEEVRAL
ALERVQSGGIVFIDEIDKVAVRAGTQQGSDVSREGVQRDLLPLVEGSNVSTRYGVVKTDHILFIASGAFHLSKPSDLIPE
LQGRLPIRVELEALSAADLVRILQEPENALVRQYSALLASDGVTLHFTQEGVQRIAEIAQQVNERVENIGARRLHTVMER
LLEEVAFIAPDGGTTALEVDAAYVDSRLKDLAQDEDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 7e-94 47