Gene Information

Name : Acife_0489 (Acife_0489)
Accession : YP_004783024.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 493346 - 493807 bp
Length : 462 bp
Strand : -
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: afr:AFE_2421 Cd(II)/Pb(II)-responsive transcriptional regulator; SMART: HTH transcriptional regulator,

DNA sequence : 
ATGCGAATTGGCGAACTTGGGCAGGCCACGTGCGTGGATCCAGAGACCATCCGTTATTATGAACGGATAGGCCTCTTGCC
CGCGCCAGTTCGGCGGGCGAACGGCTATCGCGCTTATGGCCTCGCGCATCTGGAACGGCTTGCCTTTATTCGCCACTGCC
GGGCGCTGGACATGCCACTTGCGGACGTGCAGCGACTCTTGCATCTGCTGGATCATCCGTTGGACGATTGCCTAGACGTG
GATCGGTTGATCAATACGCATCTGGCTCATGTACAGGGACGGCTCCAATCGCTACAAGCGCTGGCGAGGCAGCTTGAGCA
ACTGCGCGGACGCTGCCATGGGCGGCATACCACCGCCGAATGCGGTATCCTGCATGAGTTGGTGGCCGCTGCCCAAGGGG
AAGGGTGTGTGTGCCACGACGGTTCGGCCCCGAACAGCCCAGAGGTCATAGAAATCTCCTAA

Protein sequence : 
MRIGELGQATCVDPETIRYYERIGLLPAPVRRANGYRAYGLAHLERLAFIRHCRALDMPLADVQRLLHLLDHPLDDCLDV
DRLINTHLAHVQGRLQSLQALARQLEQLRGRCHGRHTTAECGILHELVAAAQGEGCVCHDGSAPNSPEVIEIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-16 47
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-19 47
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-19 47
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-19 47
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-19 47
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-19 47
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-19 47
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-19 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acife_0489 YP_004783024.1 MerR family transcriptional regulator BAC0058 Protein 1e-17 52
Acife_0489 YP_004783024.1 MerR family transcriptional regulator BAC0301 Protein 4e-17 47