Gene Information

Name : Acife_0402 (Acife_0402)
Accession : YP_004782950.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 414671 - 415765 bp
Length : 1095 bp
Strand : -
Note : PFAM: Integrase, catalytic core, phage; KEGG: ppw:PputW619_3971 integrase family protein

DNA sequence :
GTGGCAACGATCAATGCAAGAAAAGGTCCTGATGCGAACAACAAGCTCGTCATAATCGGGTGGCAGGCCATCATTCGGAA
ACGAGGCCACCCAAGCCAGACACGAACCTTCCGAACAAAACGCGACGCAGAGGCATGGGCCAAGGTCACGGAGTCGGAAA
TGTTACGGGGGGTCTGGCTCGACCGCTCCGAAGCAGAGAGCACAACGCTTGGTGAGGCTCTCCAGCGATATGCCGACGAG
ATATCCATCAATAAGAAAGGATCGGCACAAGAATTGTGTCGGATACGGCAATGGCTGGAGCGGCCCATCTCCAAACGAAC
ACTGAACACCCTACGAGGTAAAGATTTCGCGGCATACGTCAAGAGTCGCTTGAATGAGGGGGTGTCTCCCAACACTGTGC
GCTTGGAACTGGCCATCGTGGGGAATCTGTTTACCGTCGCCGCAAGAGAATGGGGCATGGAGTCCTTAGTGAACCCTATG
CGGCCGATCAAGCTCCCCGCTCCTGCGAAGGGCAGGAATAGACGAATTCAGCCAGGAGAATGGGGTGCGTTGATCGCGCA
GCTACCGTATCCTCACGATCACGCGGTTGTCTTGCTGGTCGAAACAGCGATGCGGCGCGGTGAGCTGTCTGGGATGCGAT
GGGAAGATGTGCAGTGGACCGCTCCATCCATTTTGTTACAAGACACGAAAAACGGGGAATCACGCGAGGTGCCGTTGTCG
CGTGCCGCATTGCAAATTCTCCATGACTTGGGCGGAACTCCAAAAGCCACCGGCTCGGTATGGAAAACGATGGCTACCCA
CTCGTTCAGCCAAGCCTTCATTCGGGCTTGCGACCGCGCCAGTATAGAAGATTTAAGGCTGCACGACCTCCGCCACGAAG
CCGCGAGCCGTCTGTTCGAGAAGGGCCTGAACCCCATGCAGGTTGCGGCCATCACCGGCCACAAGACGCTGCAAATGCTC
AAACGCTATACTCACTTGCGGGCTGAAAGACTTAGCGAAAATGCTGGGGTGAAGGATGCCGAAGGGCCGGTAAAGACTGA
TAGCGGTCATTGGGTTGCCCAAATGCCTGTTAGTATTCAGGAACCGATCACATAA

Protein sequence :
MATINARKGPDANNKLVIIGWQAIIRKRGHPSQTRTFRTKRDAEAWAKVTESEMLRGVWLDRSEAESTTLGEALQRYADE
ISINKKGSAQELCRIRQWLERPISKRTLNTLRGKDFAAYVKSRLNEGVSPNTVRLELAIVGNLFTVAAREWGMESLVNPM
RPIKLPAPAKGRNRRIQPGEWGALIAQLPYPHDHAVVLLVETAMRRGELSGMRWEDVQWTAPSILLQDTKNGESREVPLS
RAALQILHDLGGTPKATGSVWKTMATHSFSQAFIRACDRASIEDLRLHDLRHEAASRLFEKGLNPMQVAAITGHKTLQML
KRYTHLRAERLSENAGVKDAEGPVKTDSGHWVAQMPVSIQEPIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13530.1 site-specific recombinase Not tested PAGI-8 Protein 1e-49 43