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Name : Acife_0330 (Acife_0330) Accession : YP_004782885.1 Strain : Acidithiobacillus ferrivorans SS3 Genome accession: NC_015942 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 349913 - 351286 bp Length : 1374 bp Strand : + Note : TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: afr:AFE_2819 replicative DNA helicase; SMART: ATPase, AAA+ type, core DNA sequence : GTGTTCGAGTCGGCGGACTATGGCGGCGGGGTCAAGGCCCCGCCGCACTCTATTGAGGCAGAGCAATCGGTCATCGGTGC CCTGCTGATTGATCCCGATACAGCGGATCAAGTGACCGAGGCGGTGACGGCCGAAGCTTTTTATGAGCGCCGTCATCGCC AGATTTTTCAAGCGATCACTGCCATGCTGGGTGCCGGGCGGGCAGTAGACGCCGTCACGGTCTCCGAGTGGTTGCAAGAT CACGAGCAGCTTGCCGATGTGGGCGGGGTGCAATATCTTCTCATGCTCGCCAACGAGACACCCTCGGCGGCCAATGTGCT CGCCTATGCGAGCATCGTGCGGGAGCGGGCCACTCTGCGTGATCTTATCCGGGTTGGCCGGGAAATTGCCGAGCTGGCCT ATCGTCCGGAAGGGCGAGAAGCGCAGGCCCTGTTGGACGAGGCGGAAAGCCGGGTTTTTCAGCTCGCCGAAGGACAGCAG CGGGCCGGAGAGGGCTTCCGGCAACTCAAGGATGCACTTCCGGCGGTAATCGACCGGATCGAGACCATCGCCCGCGAGAA AAAAGGCGTCACCGGCCTGTCCACAGGCTTTGCCGATCTGGACGAGAAAACCTCCGGCCTGCATCCGGGTCAGCTCATCA TCGTTGCTGGTCGTCCTAGTATGGGCAAAACCTCTTTCGCCATGAATATAGCTGAGCATGTCGCCTGTAACGAAGGCAAG CCGGTGGCGGTTTTCAGCATGGAAATGCCGATAGACGAAATCGTCTTGCGCGCACTCTCGTCGCGAGGACGGGTGGACCA GCACCGGCTGCGCAATGGTAGCCTGGGTAATGATGACTGGCCGCGCATCGCGCATGCCATTGGCGAACTCGGCAATGCGC CGTTGTTTGCCGATGATTCGGCAGCGCTGACGCCGACGGATTTGCGTTCGCGGGCGCGTCGGCTGAAGCGAGAGCATGGC TTGGCGCTGGTTGTGGTCGACTATCTGCAACTCATGCAGGTGCCGGGGCGGGGTGACAATCGGGTCGCTGAGATTTCCGA GATCAGCCGTTCGCTCAAGGCCTTGGCCAAAGAGCTGTCCATCCCAGTGATTGCCCTCTCGCAGCTCAATCGTAGCCTGG AAAACCGGACCGAAAAGCGTCCGCAGATGTCGGATCTGCGTGAATCCGGTGCTATTGAACAGGACGCCGATCTGATTCTG TTCCTGTACCGCGATGAGGTGTATTACAAGGACAAGGAAGAGGTGAAAGGCATTGCCGAGGTGATTATCGGCAAGCAGCG TAACGGACCCATCGGGACCGTGCGGATGAGCTTCTTCGGTGAATATACCCGCTTTGAGAATTATGCGCCGTCCGGGGATA GTTTCGGGCATTAG Protein sequence : MFESADYGGGVKAPPHSIEAEQSVIGALLIDPDTADQVTEAVTAEAFYERRHRQIFQAITAMLGAGRAVDAVTVSEWLQD HEQLADVGGVQYLLMLANETPSAANVLAYASIVRERATLRDLIRVGREIAELAYRPEGREAQALLDEAESRVFQLAEGQQ RAGEGFRQLKDALPAVIDRIETIAREKKGVTGLSTGFADLDEKTSGLHPGQLIIVAGRPSMGKTSFAMNIAEHVACNEGK PVAVFSMEMPIDEIVLRALSSRGRVDQHRLRNGSLGNDDWPRIAHAIGELGNAPLFADDSAALTPTDLRSRARRLKREHG LALVVVDYLQLMQVPGRGDNRVAEISEISRSLKALAKELSIPVIALSQLNRSLENRTEKRPQMSDLRESGAIEQDADLIL FLYRDEVYYKDKEEVKGIAEVIIGKQRNGPIGTVRMSFFGEYTRFENYAPSGDSFGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-92 | 48 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-83 | 47 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 6e-77 | 46 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 7e-89 | 46 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-88 | 45 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-84 | 45 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-83 | 45 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-83 | 45 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-72 | 42 |
