Gene Information

Name : Acife_3258 (Acife_3258)
Accession : YP_004785642.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3186967 - 3187887 bp
Length : 921 bp
Strand : -
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: afr:AFE_3300 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence : 
ATGCCGTATCACCTTCGCATTGGTACCCGCGCCAGCCCACTGGCCGTCTGGCAGGCAGAGCATGTCCGTGCCGCCCTGTT
GCGACAGCACCCGGAAATAACCGTCGAGATCATCGCCATGACCACCAGTGGGGATACGCTTCTGGATGCACCCCTGCATG
CGCTGGGCGGTAAAGGCCTCTTCGTCAAGGAAATCGAGGATGCCCTGCAGCAGCAGCGGGTGGATATTGCCGTACACTCC
ATGAAGGATGTGCCGGCCCAACAGCCTGATGGTCTGGAGATCGTCGCCATCATGGCCCGGGAAGACGTCCGGGATGCCTT
CGTCAGCAATGCCTTTCTCCACCCCGATGCCCTGCCGAAGGACGCACGGGTGGGCAGTTCCAGCCTGCGGCGGCGGGCGC
AATTGCTGGAGCGCTACCCCCATCTGCGGGTCGATGATTTGCGCGGCAATGTCGCCACGCGCCTGCGCAAGCTGGATGAG
GGGCATTATGCGGCGATCATCCTCGCCGCTGCGGGCCTTAAACGCCTGGGTTTGTCGGATCGTATCGCCCACCTGCTGGA
TATCGATTGCTCTCTGCCGGCAGTGGGACAAGGGGCCATAGGCATTGAGGCGCGCAGCGACGACCGGCGGACCCGGGAAC
TGCTGGCACCCCTGGCCGATGCCGACACCCACAACTGCGTGCTGGCAGAGCGCAGCATGAATCGGGTGCTGGGAGGGGAT
TGCCGGCTGCCGGTGGCGGCGCTGGCGCAATGGCAGGGGCCACAGATGGTTTTGCGTGGGCTGGTCGCCACCCCGGACGG
CCGCCGGGTACTCCACGCCGAAGCGCGGGGCGGTGACCCGGTTGCGCTCGGCATGACCGTCGCCGCGGCGCTGGTCGCGC
AAGGGGCGGCACAGATTATCGCGGATGTCCGAAACACATGA

Protein sequence : 
MPYHLRIGTRASPLAVWQAEHVRAALLRQHPEITVEIIAMTTSGDTLLDAPLHALGGKGLFVKEIEDALQQQRVDIAVHS
MKDVPAQQPDGLEIVAIMAREDVRDAFVSNAFLHPDALPKDARVGSSSLRRRAQLLERYPHLRVDDLRGNVATRLRKLDE
GHYAAIILAAAGLKRLGLSDRIAHLLDIDCSLPAVGQGAIGIEARSDDRRTRELLAPLADADTHNCVLAERSMNRVLGGD
CRLPVAALAQWQGPQMVLRGLVATPDGRRVLHAEARGGDPVALGMTVAAALVAQGAAQIIADVRNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-64 55
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-64 55