Gene Information

Name : Acife_3171 (Acife_3171)
Accession : YP_004785560.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3099231 - 3100115 bp
Length : 885 bp
Strand : -
Note : KEGG: pna:Pnap_0429 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core

DNA sequence :
GTGACGGTAGAGACGCGGCGGACGTGGATCGCACCGAATCCGTCGATCTCTATTCAACGGCAGTGTCACCTGGCTGGCGT
GGCCCGAGCCACGGTTTACGCGCAGCGACCCGAAAAGCCATTGGACGCAGAGGATAAAGTGCTCATGGATTTACTGGATG
CCCAATACACAACAACGCCGTTTTATGGGAGTCGCCGGATGACCGTATATCTCCAAAATCTGGGGTTTAGGGTCAATCGC
AAACGGGTGCAGCGATTGATGCGCACCTTGGGTTTGGCGGGCATGGCTCCAGGGCCGCACACCAGCCGACCCCATCCAGA
GCATAAGATTTATCCCTACCTGCTGCGGGGGCTGACTATTGATCGCCCCGGTCAGGTCTGGAGTACGGATATCACGTATA
TCCGGCTCCGCCATGGATTTGTCTATCTGGTGGCTATTATGGACTGGTACAGCCGTAAGGTGTTGAGCTGGAGGATCAGT
AATACCATGGAGGCAGAGTTCTGTGTGGCCTGTCTGGAAGAGGCGCTACAACGCTATGGTGCGCCGGAGATCTTCAATAC
GGACCAAGGCAGCCAATTCACCGCTGAGGCGTTTACAGGCTTACTTCAGGCGCATGGTGTACAGATCAGCATGGACGGTC
GTGGTCGCGCCCTGGATAACATCTTCGTGGAGCGGCTTTGGCGCAGTGTGAAGTACGAGGATATTTACCTGCGGGGCTAT
GGCCATGTACCGGAACTGATGGTTGGGCTGACTGCCTACTTTGAGTTTTACAATAGTCGCCGCCCGCATCAGTCTCTCGG
CTATCTGACACCAGATCAGGTATACCTGACAGGGCAAGGGGGCGGCGCCTGCATTGTGGACCGCTATCCGAAGGTTGCAG
CATAA

Protein sequence :
MTVETRRTWIAPNPSISIQRQCHLAGVARATVYAQRPEKPLDAEDKVLMDLLDAQYTTTPFYGSRRMTVYLQNLGFRVNR
KRVQRLMRTLGLAGMAPGPHTSRPHPEHKIYPYLLRGLTIDRPGQVWSTDITYIRLRHGFVYLVAIMDWYSRKVLSWRIS
NTMEAEFCVACLEEALQRYGAPEIFNTDQGSQFTAEAFTGLLQAHGVQISMDGRGRALDNIFVERLWRSVKYEDIYLRGY
GHVPELMVGLTAYFEFYNSRRPHQSLGYLTPDQVYLTGQGGGACIVDRYPKVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABK1_0264 YP_005512836.1 insB Not tested AbaR4d Protein 2e-61 53
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 6e-65 51