Gene Information

Name : Acife_3156 (Acife_3156)
Accession : YP_004785549.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3083633 - 3084418 bp
Length : 786 bp
Strand : -
Note : PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: afr:AFE_2225 glucose 1-dehydrogenase, putative

DNA sequence :
ATGATCAATCTGGACTTACAGGGCCGGCGGGCGCTGGTCACCGGTGGGAGCGGTGGCCTCGGGCGGGCTATTGCCGAGAC
ACTGGCAGCGGCCGGGGCACAAGTGGCAGTACATTACCGGAAAGGTCTGGACGAAGCCGAGGCAGTGGTCGCGGCCATTC
AGAAACTGGGCGGCAGAGCACAGGCTTTCCAGGCAGATGTGTCTGATCCGGCGGCCGTGGAGAAACTGCTGCAGGAAATT
GAATCCGCCTTCGGCGGCCTGGATATCCTCGTCAACAACGCCGGCATGGATGGTCCGCGCGCCAGCGTCGGCGAGGATGA
TCCGCAGGTATGGGAAAAGGTTCTCGCCGTCGATCTCATGGGTCCCTACTATTGCGCCCGTGCCGCCATTCCGCGCATGG
AGAAGGCCAAACGCGGGGTGATCATCAATATCACCTCCGTGCATGAGTTTATTCCCTGGGAAGGCTACAGTGCCTATACC
AGCGCCAAGGCAGGCTTGTCCATGTTCACCAAGACCCTCGCCCAGGAAACGGCGGATAAGGGCATCCGGGTGGTGGCTAT
CGCTCCCGGCGCCATCCAGACACCCATTAATCAGTCGGTCTGGGCTGACCCCCAATCCCTTAAAGACCTGGACGAGAAAA
TCTCCATGGGCCGTCTTGGCAGGCCCGAAGAGATTGGCAATGTGGTGGCCTTTCTCGCCAGTGATCTGGCCAGTTACATT
ACCGGCACCACCCTCGCGGTGGATGGCGGGATGCTGATTTACCCTGAATTCCGCCACGGCGGCTGA

Protein sequence :
MINLDLQGRRALVTGGSGGLGRAIAETLAAAGAQVAVHYRKGLDEAEAVVAAIQKLGGRAQAFQADVSDPAAVEKLLQEI
ESAFGGLDILVNNAGMDGPRASVGEDDPQVWEKVLAVDLMGPYYCARAAIPRMEKAKRGVIINITSVHEFIPWEGYSAYT
SAKAGLSMFTKTLAQETADKGIRVVAIAPGAIQTPINQSVWADPQSLKDLDEKISMGRLGRPEEIGNVVAFLASDLASYI
TGTTLAVDGGMLIYPEFRHGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-24 41