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Name : Acife_3075 (Acife_3075) Accession : YP_004785473.1 Strain : Acidithiobacillus ferrivorans SS3 Genome accession: NC_015942 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 3002662 - 3003843 bp Length : 1182 bp Strand : - Note : PFAM: Integrase, catalytic core, phage; KEGG: ddc:Dd586_3778 integrase family protein DNA sequence : ATGCTGACAGATATAAAGATCCGTCAGGCCAAAGCTACAGGCAAAACCTGTAAGCTGACGGATGGGCGCGGCCTCTATCT GGAGGTCACCCCGACGGGCGCGAAACACTGGCGCTATCGGTACCGCATTGCCGGCAAGGAAAACGTCTATGCCATGGGCA ACTACCCGGAAATATCCCTGCAAGAGGCCAGAAAGGCCCGAGAGGACGCCCGAGACCTCGTAAAACAGGGTGTCCACCCC GCCCATATCCGCCGTAAGAACCAAGGGGAAAAGGAAGCTGGTAACGCGATTACATTCAAGAAGGTAGCTGACGAATGGCT GGTTAAAAAACAGCCACATTGGTCGCCCGGTTATTATGCACGGATCAAGGATGGTCTCGAAAAAAATGCCTATCCCGCGA TTGGGAAAATGGCGATTCGCAGCATTAACTCGGCAGATATTCTAAATATTATGAGGGAGATGGAGGCGCGGGGCGCGGAG ACTTATGCGATGCACCTGCGGTACTGGTGCTCGGCTGTTTTTTGCTACGCGGTGGTGACATTGAGGGCTGACAGCGACCC CGCCGCCGCACTCAAGGGAGCGATAATCCGGCCCAAGATCAGCCACAGTAAGGCTATGAATGCAGCAGATATTAAGGATT TTCTGAGAAGGCTCGACGGCTACGGTGGGAATCTCACGACGATCATCATTCTGCGGCTGTTGCTGTATTTGTTCGTGCGG ACGGTAGAGCTACGCAAAGCCCGCTGGGAGGAGTTCAATCTGGAGGCGGGAGAGTGGCTGATACCCGCCGAGAGGATGAA AAAACGTCGGGCGCACCTGGTCCCGCTCCCGCATCAAGCTATTGAATTGTTGAAAAAACTGAATGCCATCACAGGGTCAG GCGAGTGGCTGTTTAATAATTCCCGAACACCTGGAGAACGCATCGGCTTTACTACGGTGAATCGTGCTTTGGAGTACATG GGGTATCCGTCCGGTTGTTGGACTGGCCATGATTTCCGCGCAACGGCGTCAACGCGCCTGCATGAGCTGGGGTTTGCGAG TATGGTCATTGAGCGTCAATTGGCTCATGTCGAGGGGAACGCGACTAAGGCGGCCTACAATCACGCCGAATATCTGCAAG ATCGTCGAATCATGATGCAGGCCTGGGCCGACTGGATCGACGCGACCCGGAAGGAAGATTAG Protein sequence : MLTDIKIRQAKATGKTCKLTDGRGLYLEVTPTGAKHWRYRYRIAGKENVYAMGNYPEISLQEARKAREDARDLVKQGVHP AHIRRKNQGEKEAGNAITFKKVADEWLVKKQPHWSPGYYARIKDGLEKNAYPAIGKMAIRSINSADILNIMREMEARGAE TYAMHLRYWCSAVFCYAVVTLRADSDPAAALKGAIIRPKISHSKAMNAADIKDFLRRLDGYGGNLTTIIILRLLLYLFVR TVELRKARWEEFNLEAGEWLIPAERMKKRRAHLVPLPHQAIELLKKLNAITGSGEWLFNNSRTPGERIGFTTVNRALEYM GYPSGCWTGHDFRATASTRLHELGFASMVIERQLAHVEGNATKAAYNHAEYLQDRRIMMQAWADWIDATRKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-69 | 43 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 4e-70 | 43 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 3e-70 | 43 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 1e-68 | 42 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 9e-69 | 42 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 9e-69 | 42 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 1e-68 | 42 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 1e-68 | 42 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 1e-68 | 42 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 1e-68 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acife_3075 | YP_004785473.1 | integrase family protein | VFG0783 | Protein | 5e-69 | 42 |
| Acife_3075 | YP_004785473.1 | integrase family protein | VFG0598 | Protein | 6e-69 | 42 |
