Gene Information

Name : Acife_0295 (Acife_0295)
Accession : YP_004782850.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 308530 - 309444 bp
Length : 915 bp
Strand : +
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: afr:AFE_2850 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence :
ATGAGTACCGCATCTGCTGTCCTGCCAGTCGAACGCCAGCAGATTGACGCCTTTCTCGACGCGCTGTGGCTGGAAAAAAA
CCTCGGTGAAAATACCCTTGTCGCCTACCGGCAGGATCTTCTGCAGGTGGCCGTCGCGCTCGCGGCGCAGGGTCTGAGTC
TGGGTACCGCCGATGAAGGGGCGCTGGCACGCCTGCTGGGGCAGAAGTTACAATCCGGGGCGGCCTTGCGCTCCGTGGCC
CGGCTGCTTTCCAGCATGCGCCGCTTCTACGGTCACGCAGAGCGGGAGGGCTGGGTAACCCGTGATCCCAGCCGTAACCT
GCAAAGTCCCCGCCTTGGTCGCGCGTTACCCCATGTCCTCAGTGAAACAGAAATAGAGGCATTGCTGCTAGCCCCCGATT
GCACACGCCCTTTGGGACTGCGCGATGCAGCCATGCTGGAGTTGATGTACGCCTGCGGTTTGCGGGTGTCGGAGCTGGTG
AATCTGGAGATGCGCCAGGTGGACCTCAGTGCCGATCTGGTGGTGGTTTTTGGCAAGGGTCGCAAGGAACGCCTGGTGCC
CATGGGGGAAGTGGCCGCCGGACGCATGGCGCAGTATCTGCAAAGTGGTCGTCCGCAGATATTGGGCGAACGCATCAGTG
CCGCCATTTTTGTGACGGGACGCGGGGCTGCCATGACGCGGCAGCGTTTCTGGCAAAACATTGAGCATTACGCGCAGTCC
GCTGGAATTACTCAGACCGTGTCGCCGCATAGCTTGCGCCACGCCTTCGCTACCCATCTGCTGAATCATGGCGCGGATCT
GCGCAGTGTGCAGTTGATGCTTGGCCACGCAAATCTCTCCACCACGGAGATTTATACCCATGTGGCGCAGGCGAGGCTCA
AGGAATTACATCAGAAGCATCACCCGCGCGGGTGA

Protein sequence :
MSTASAVLPVERQQIDAFLDALWLEKNLGENTLVAYRQDLLQVAVALAAQGLSLGTADEGALARLLGQKLQSGAALRSVA
RLLSSMRRFYGHAEREGWVTRDPSRNLQSPRLGRALPHVLSETEIEALLLAPDCTRPLGLRDAAMLELMYACGLRVSELV
NLEMRQVDLSADLVVVFGKGRKERLVPMGEVAAGRMAQYLQSGRPQILGERISAAIFVTGRGAAMTRQRFWQNIEHYAQS
AGITQTVSPHSLRHAFATHLLNHGADLRSVQLMLGHANLSTTEIYTHVAQARLKELHQKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-56 51
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-56 51