Gene Information

Name : Acife_0293 (Acife_0293)
Accession : YP_004782848.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 306879 - 307223 bp
Length : 345 bp
Strand : +
Note : TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: afr:AFE_2852 ribosomal protein L19; PFAM: Ribosomal protein L19

DNA sequence :
ATGAACATCATTGACGAAATTAATCAAGAACAAATGAAGTCGGTACTGCCGACTTTTGGTGCGGGCGACACAGTAGCCGT
TCACGTAAAGGTGAAGGAAGGCGACCGCGAGCGTATCCAGATTTTTGAGGGCATTTGCATTGCACGCCGTAATCGTGGCC
TGCACTCTGCTTTCACGGTCCGCAAAATCTCTAACGGTGAAGGGGTGGAGCGCGTGTTTCCCTCCTATTCGCCGCTGGTG
ACCAAAGTAGAAGTGAAGCGTCGTGGTGATGTGCGCCGCGCCAAGCTCTACTACCTGCGTGATCTTTCTGGTAAGGCCGC
ACGCATCAAGGAAAAGTTGGGCTGA

Protein sequence :
MNIIDEINQEQMKSVLPTFGAGDTVAVHVKVKEGDRERIQIFEGICIARRNRGLHSAFTVRKISNGEGVERVFPSYSPLV
TKVEVKRRGDVRRAKLYYLRDLSGKAARIKEKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 7e-33 67
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 1e-29 63