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Name : Acife_2655 (Acife_2655) Accession : YP_004785059.1 Strain : Acidithiobacillus ferrivorans SS3 Genome accession: NC_015942 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2645003 - 2646268 bp Length : 1266 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; manually curated; TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: afr:AFE_0380 seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase DNA sequence : ATGCTTGATCCCAGCTTGCTGCGCAGCGCACCAGAAAAAGTAGCCGCAGGCCTCGCCCGTCGTCACTTCACTCTGGATGT GACGGCCCTGAGCACCCTCGACCAGCAGCGTAAAACCCTGCAGATTCAGCTCGAAGAGCTGCGCAACGCCCGCAATGAGG CCTCCAGACAGATCGGTCAGGTGCGCCGTCAGGGGCTCGATACCAGCGCGATGCAGATCGCGGCGGCGCAGCACGGTGAG GAGATCAAGACCCTGGAGCAATCTCTGGAAAGCATCCTTGCTGAATGGGAGAGCCTGACCAGCAATCTGCCCAATATCCC GCAGGATTCAGTGCCCGATGGCCGTGATGAACGGGACAATGTGGTATTGCGTCACTGGGGCACGCCCCGCGCCTTCGATT TCTCTCCCCACGACCATGTCGATCTGGGCGAGGCCTTGGGTATTATTGATTTCGCGGCGGGCGCCCGCCTCGCTGGTGCC CGCTTTGTGGTGTTGCGCGGCCTCGGTGCCCGTCTTGAGCGCGCCCTGACGCAATTCATGCTGGATTTGCATACGATGGA ACACGGCTACTGCGAAATTGCGCCGCCCTTGCTCGCCAACGCCGATTCCCTCTTTGGCACTGGGCAGCTCCCCAAATTCG AAGAAGACCTCTTCGCCTTGAGGGACGACCCCTATTACCTGATCCCCACTGCCGAAGTGCCGCTTACCAATCTTCTGCGC GGTGAGATTGTCGCTACCCTGCCGCAATGCTTCTGCGCCTACACCCCCTGTTTTCGCCGCGAAGCGGGAGCTTATGGGCG CGACACCCGTGGCATGATCCGTCAGCACCAGTTTGACAAGGTGGAGCTGGTGCAGATCGTCCGCCCCGAAGATTCCGTCC GCGCCCACGAAACACTTACCGCCCACGCCGAAAAGGTATTGCAACTTCTGGAGCTGCCCTACCGGGTGATGGCCCTCTGT GCGGGGGATCTGGGCTTCAGCGCTGCCAAGACCTATGACCTCGAAGTCTGGCTGCCGGGCCAGAATCAGTACCGGGAAAT CAGCTCCTGCAGCAATTTCGAAAGCTTTCAGGCACGCCGCCTGCAGTTACGCTACCGCGCCGAAGATGGCAAGCCCCAGC TCGCCCATACCCTCAATGGTTCCGGCCTCGCCATCGGCCGCACCCTGGTTGCCCTCCTGGAAAACCATCAGCGAGCGGAT GGCAGTATCGAAATTCCTACCGCCTTGCGTCCCTATCTCGGCGGGATGGACGTCATTAAGGCCTGA Protein sequence : MLDPSLLRSAPEKVAAGLARRHFTLDVTALSTLDQQRKTLQIQLEELRNARNEASRQIGQVRRQGLDTSAMQIAAAQHGE EIKTLEQSLESILAEWESLTSNLPNIPQDSVPDGRDERDNVVLRHWGTPRAFDFSPHDHVDLGEALGIIDFAAGARLAGA RFVVLRGLGARLERALTQFMLDLHTMEHGYCEIAPPLLANADSLFGTGQLPKFEEDLFALRDDPYYLIPTAEVPLTNLLR GEIVATLPQCFCAYTPCFRREAGAYGRDTRGMIRQHQFDKVELVQIVRPEDSVRAHETLTAHAEKVLQLLELPYRVMALC AGDLGFSAAKTYDLEVWLPGQNQYREISSCSNFESFQARRLQLRYRAEDGKPQLAHTLNGSGLAIGRTLVALLENHQRAD GSIEIPTALRPYLGGMDVIKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-94 | 55 |
