Gene Information

Name : Acife_2192 (Acife_2192)
Accession : YP_004784632.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine sulfhydrylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2173225 - 2174439 bp
Length : 1215 bp
Strand : -
Note : KEGG: afr:AFE_2063 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme

DNA sequence : 
ATGAAGCCCAAAGATTCCAATCCTGACTGGGCGAGGCAGCTACGCCCGGAAACCCTCGCCATCCGGGCCGGCATCCACCG
CACCCAGGAGCAGGAGCACAGCGAGGCCATCTTCCCGACCTCCAGCTTTGTTTTTAACTCGGCAGAAGAGGCCGCGGAGC
GTTTTGCGGGAAGGGCGCCGGGGAATATCTATGCGCGCTTCACCAACCCCACTGTACGTACTTTTGAAGAGCGGCTCGCC
GCGCTGGAGGGTACGGAAGCTTGTGTCGCCACGGCCTCTGGCATGGCCGCCTGCCTGACCGTTTTCATGGGAATGCTCAA
GGCGGGCGATCATATCGTCGCCTCCCGCTCTATTTTTGGTACGACGGTGCAACTGCTCAGTAATATTCTCGACCGCTTCG
GGGTGGAGACGAGCTTTGTGCCGTTGGCGGATGTGGCGGCCTGGCGTGCCGCATTGCGTCCCAATACCCGGATGCTCTTC
CTCGAAACGCCGTCTAATCCGCTCACTGAGATCGGCGACATACAGGCCTTGGCGGATCTGGCCCACGCGCATGATGCCTG
GCTGGTGGTGGACAACTGTTTCTGTACCCCGGCCTTGCAGCAGCCTCTCAAGTTTGGTGCCGATCTGGTTGTTCACTCCG
CCACCAAATATCTGGACGGGCAGGGGAGAACCCTGGGCGGGGCGGTTTGCGGCAGTGCCGAACTGCTCAATAGCGGGCCA
CGCAATTTCGTGCGTACGGCGGGTCCGAGTCTCAGTCCTTTCAACGCCTGGGTGCAGCTCAAAGGTCTGGAGACTCTCGG
GTTGCGTATGGAGCGTCATTGCGCCAATGCCCAGGAGATTGCCGAATGGCTGGAGGCACGGCCGGAGGTGGTACGGGTCT
ATTATCCGGGTCTCAAGAGTCATCCCCAGCAAGCCTTGGCGGCGCGCCAGCAACGCCTGCCGGGCGCCATTCTGGCCTTT
GACGTGCGTGGCGGCCAGGCAGCGGCGTGGGCCTTTGTGGATGCCCTGCGCCTGATCTCCCTGACGGCCAATCTCGGGGA
TGCCAAGACCACCATTACCCACCCTGCCAGCACGACCCACAGTCGGGTCAGTCCTGAAGTACGAGCGGCGGCGGGGCTTG
GCGATGGATTGCTGCGGATCAGTGTCGGTCTGGAGCATACTGACGACCTGCGCGATGATCTGGAGCGCGGCTTTGCCGCT
CTTGCCGCCCCCTGA

Protein sequence : 
MKPKDSNPDWARQLRPETLAIRAGIHRTQEQEHSEAIFPTSSFVFNSAEEAAERFAGRAPGNIYARFTNPTVRTFEERLA
ALEGTEACVATASGMAACLTVFMGMLKAGDHIVASRSIFGTTVQLLSNILDRFGVETSFVPLADVAAWRAALRPNTRMLF
LETPSNPLTEIGDIQALADLAHAHDAWLVVDNCFCTPALQQPLKFGADLVVHSATKYLDGQGRTLGGAVCGSAELLNSGP
RNFVRTAGPSLSPFNAWVQLKGLETLGLRMERHCANAQEIAEWLEARPEVVRVYYPGLKSHPQQALAARQQRLPGAILAF
DVRGGQAAAWAFVDALRLISLTANLGDAKTTITHPASTTHSRVSPEVRAAAGLGDGLLRISVGLEHTDDLRDDLERGFAA
LAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-54 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acife_2192 YP_004784632.1 O-succinylhomoserine sulfhydrylase BAC0207 Protein 4e-64 44