Gene Information

Name : Acife_2131 (Acife_2131)
Accession : YP_004784572.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Virulence
Product : two component winged helix family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2100697 - 2101359 bp
Length : 663 bp
Strand : -
Note : KEGG: afr:AFE_2032 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region

DNA sequence : 
ATGCGTATTCTCCTCGTTGAAGATGATCGAATGATCGGCGAAGCCATCACGGTGGCTCTGCGGGATGCGGCTTATGCCGT
GGATTGGGTGCGGGACGGCGAAAGCGCCTTGCGGGCCATCGGCAACCAGGAGCACCAGGCGGTGTTGCTGGATCTGGGTC
TACCCAAACTGGACGGCCGCGCGCTGCTGAGAAAGCTCCGGGCCGCTGGCAGCACCTTGCCCGTTATCATCATCACTGCC
CGCGATGCGCTGGCGGACCGGGTCGATGGCCTGGACCTCGGCGCCGACGACTATCTGGTTAAACCCTTTGCAATGGATGA
ACTGCTGGCCCGCTTGCGCGCTATCATCCGCCGTCAGGGCGGACAGGCCACCCCGGTACTCAGCAATGGATTGCTGCAAC
TCAACCTGAGCACCCGTGAAGTGCAGTATGGCGATGCACAAGTCCTGCTGACTGCCCGGGAATTCGCCTTGCTGCAAGCT
TTGTTGCTGCGCCCCGGTGCCATTCTCAGCCGTGCCCAACTCGAAGAGCGCTTATACGGCTGGAACGAAGCCGTGGAGAG
CAACACCATTGATTTCCTGATCCACGGCATTCGCAAAAAACTCGGTGCGGAGGTTATCAAAAATGTCCGTGGCGCCGGTT
GGATGGTCGTCCGCCGGCCATGA

Protein sequence : 
MRILLVEDDRMIGEAITVALRDAAYAVDWVRDGESALRAIGNQEHQAVLLDLGLPKLDGRALLRKLRAAGSTLPVIIITA
RDALADRVDGLDLGADDYLVKPFAMDELLARLRAIIRRQGGQATPVLSNGLLQLNLSTREVQYGDAQVLLTAREFALLQA
LLLRPGAILSRAQLEERLYGWNEAVESNTIDFLIHGIRKKLGAEVIKNVRGAGWMVVRRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-29 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acife_2131 YP_004784572.1 two component winged helix family transcriptional regulator BAC0197 Protein 2e-28 43
Acife_2131 YP_004784572.1 two component winged helix family transcriptional regulator BAC0487 Protein 2e-30 42
Acife_2131 YP_004784572.1 two component winged helix family transcriptional regulator BAC0288 Protein 3e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acife_2131 YP_004784572.1 two component winged helix family transcriptional regulator VFG0473 Protein 7e-33 42