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Name : Acife_2054 (Acife_2054) Accession : YP_004784500.1 Strain : Acidithiobacillus ferrivorans SS3 Genome accession: NC_015942 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein mutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2034206 - 2036746 bp Length : 2541 bp Strand : + Note : SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: afr:AFE_1760 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA DNA sequence : ATGACTGATCCTACTCCTCTGCAAAACCACACCCCGATGATGCGTCAGTATTTCGGGCTGAAGGAAGAATGCCCGGATGC GCTGCTTTTCTATCGCATGGGGGATTTTTACGAGCTATTTTTTGAAGACGCCGAAAAAGCCGCCCGCCTCCTCGGCATCA CCCTCACCAGCCGCGGACAAAGCGCCGGACAGGCCATTCCCATGGCGGGGGTACCTGTCCAAAGTGTAGATGGCTATCTC GCGAAACTGGTGCGTCTGGGCGAACGGGTGGCCATTGGCGAGCAAATTGGCGAAGCGACCACCGCGAAAGGTCCCGTGGA ACGCGCCATCGTGCGGGTTATCACCCCCGGTACCATCATTGACAGTGCCTTATTGGATGCCGGGCAGGAGCCTCTGCTCC TGGCCCTCTGCCCGGACGGCCAGCGTTGTGGCCTGGCCTGGCTGGATGCCGCCGGAGGGCGCCTCATGGTGCGTGAGGTG GCCAACACCGCCATCGCAGATGCCATAGCGCGGCGTCCTGTCGCAGAAATCATCGCCCCGGAAGATACGCCGCTTCCGGT CGGAGTCGACCCGCAAAAATTGCAACTCCTGGAGAAAACCGGTTTTCAAACACGGCGCACCGAGGCAGTACTTGAACGCT ATTTTGGGGAACGACTGGCGAGTTTCGGGTGCAACGACTGGCCCCTCGCCCTACGCGCCGCTGCCGCACTCCTCAATTAT GCCGAGGCCCAACTACGCAGCAGCCTGACCCAAGTCCAGCGAATTCATCCGGAGCGCACTGAAGATGAGCTCTATCTGGA TGCGACCGCCTTGCGGGCACTGGAAGTGGTGGAAAGCCTGCAAGGGAATGGTCCCACTTTGTTCAGCTTGTTGCAAAAAA CCCAGACGGCTATGGGCGCCCGCTTGCTCCGTCGCTGGCTGCTACGACCACTACGCCAGGGACCCGTGCTTGCGAGCCGC CAGGAAGTCGTCGCAGCGCTTACCCAAGGCAGCGGACCAGTCGCCATCCAGAAGGCCTTGCACGGTATTGCGGATGCGGA GCGCATTCTCACCCGCATCGCCGTAAAAAGTGCGAGCCCCCGCGATTTCGCCCAACTCCGCAGCACCTTGCAGGCGCTGC CCACGCTACGCGCCACCCTCGAAGAAACAGGGCATCCGGCATTGGCTCCTTATCAGGAGCGCATAGCGCTCTTTGCCGCC CTCCGCACGCTGCTGGAAGAGTCCTTAGTGGATGCCCCGCCCATGACCCAGCGGGACGGTGGTTACATACGTGCCGGCTA CGATGCCGAATTGGATCGGCTTCAACAACTTAGTCAGAATTTGCAGGAAGTACTGCGTGATCTGGAGCAGCAGGAGCGCC AGCGTACCGGCATCACCCAACTCAAAATCCAGTTCAACCGGGTGCATGGCTTTTACATCGAGATCAGCCGCAGCTATCAA GGGCCCATTCCTGACGACTATCGCCGTCGCCAGACCACCAAAAACGCGGAACGCTACATCAACGATGCCCTGAAAGTCAT TGAAGATCAGGCCCTCTCGGCAGAGAGCCTGGCCCTGAGCCGGGAGCGCCTGCTCTTCACGCAGGTCCTGGAAGCGGCAG TCCCCGAAGTGCCGACCCTGCAAGATGCCATGACCGCCGTTGCCGAACTGGACGGTCTCAGCACGCTGGCCGAACGCGCC ATCACCCTGCACTGGTGTGCCCCGCAGTTCGTCAGAGAACCGCTTTTACACATCCGTGACGGTCGTCATCCCGTCGTAGA AGCCCAGATCGGCAGTAATTTCGTGCCCAACGATCTCAATTTTGATAAAGAACAGCGGATGCTGCTTATCACCGGTCCCA ATATGGGCGGCAAATCCACCTACATGCGGCAAACAGCGCTCATCGTCCTGCTCGCCCACATCGGCAGCTGGGTGCCTGCC CGCGAAGCCATCATTGGCCCCATCGACCAGATTTTCACCCGCATCGGCGCTGCCGACGATCTGGCCGGCGGTCGCTCCAC CTTCATGGTGGAAATGAGTGAAACAGCGCGCATCCTCCATCTCGCTACGGCCCAAAGCCTGGTGATTCTGGATGAAATCG GACGGGGCACCGCCACTTATGACGGTCTCTCCATCGCCTGGGCCACGGCCGAGGCGCTAGTGGAACGGGGCGCCTGCACG CTCTTCGCCACCCACTATTTTGAACTGACGGAGCTGGATCTTCCCGGCCTGCGTAACGCTCATCTCGACGCTTTGACACA AGGGGATCAGGTCGTATTCCTGCATCGGGTGGAGAGTGGTCCGGCCACGCAGAGCTACGGACTGGCGGTTGCCAAGCTTG CCGGGATTCCGGATCCAGTCGTGCGGCGCGCCCGCCAGCGACTCAGTCAACTGGAAGAAACCGCCCAACAGCCGACCCGC AATACAGCGCCCGCCCAGTTGCCTCTCTTCCAGGCCGCTCCGCATCCGGCGGTGCAGCGGTTAAGTCAGCTGGAACCAGA CCAACTCAGCCCCAGGCAGGCCCTGGATCTGCTCTATACACTCAAAGAGTTGGCGCAATAA Protein sequence : MTDPTPLQNHTPMMRQYFGLKEECPDALLFYRMGDFYELFFEDAEKAARLLGITLTSRGQSAGQAIPMAGVPVQSVDGYL AKLVRLGERVAIGEQIGEATTAKGPVERAIVRVITPGTIIDSALLDAGQEPLLLALCPDGQRCGLAWLDAAGGRLMVREV ANTAIADAIARRPVAEIIAPEDTPLPVGVDPQKLQLLEKTGFQTRRTEAVLERYFGERLASFGCNDWPLALRAAAALLNY AEAQLRSSLTQVQRIHPERTEDELYLDATALRALEVVESLQGNGPTLFSLLQKTQTAMGARLLRRWLLRPLRQGPVLASR QEVVAALTQGSGPVAIQKALHGIADAERILTRIAVKSASPRDFAQLRSTLQALPTLRATLEETGHPALAPYQERIALFAA LRTLLEESLVDAPPMTQRDGGYIRAGYDAELDRLQQLSQNLQEVLRDLEQQERQRTGITQLKIQFNRVHGFYIEISRSYQ GPIPDDYRRRQTTKNAERYINDALKVIEDQALSAESLALSRERLLFTQVLEAAVPEVPTLQDAMTAVAELDGLSTLAERA ITLHWCAPQFVREPLLHIRDGRHPVVEAQIGSNFVPNDLNFDKEQRMLLITGPNMGGKSTYMRQTALIVLLAHIGSWVPA REAIIGPIDQIFTRIGAADDLAGGRSTFMVEMSETARILHLATAQSLVILDEIGRGTATYDGLSIAWATAEALVERGACT LFATHYFELTELDLPGLRNAHLDALTQGDQVVFLHRVESGPATQSYGLAVAKLAGIPDPVVRRARQRLSQLEETAQQPTR NTAPAQLPLFQAAPHPAVQRLSQLEPDQLSPRQALDLLYTLKELAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 6e-153 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acife_2054 | YP_004784500.1 | DNA mismatch repair protein mutS | VFG0562 | Protein | 2e-172 | 49 |
