Gene Information

Name : Acife_1995 (Acife_1995)
Accession : YP_004784441.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Virulence
Product : phosphoadenosine phosphosulfate reductase
Function : -
COG functional category : R : General function prediction only
COG ID : COG3969
EC number : -
Position : 1970745 - 1971965 bp
Length : 1221 bp
Strand : -
Note : PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: dds:Ddes_1579 phosphoadenosine phosphosulfate reductase

DNA sequence :
ATGAGCAAAACCTACCTTCCCGTTGACGTATACACCGCCGCCAGGCAGCGCATGGAGCGGGTATTCGACGACTTCCCCAG
CGTCTACCTCTCTTTTTCAGCGGGCAAGGATTCCGGCGTCATGCTAAATCTAGCGCTTGAGGTGGCACGTGAGAAAGACT
GTCTGCCACTCAACGTGCTGATTCTGGATCTGGAAGCGCAATACCAGCACACCGCCGATTACATCCAGCGCGTGGCGGAC
AACCCGGACGTAAACCTGCACTGGGTTTGTCTGCCTCTCCACCTGCGCAATGCCGTGAGCCAGATTCAACCGCACTGGAT
GTGCTGGGACCCGGACGCGAAAGATTTGTGGGTGCGTGATTTGCCGGATCACCCCAAAGTCATTTCTGACGAAAATTACT
TCCCATTTTTCAAGCGTGGGATGGAGTTCGAAGAGTTCGTTCCGGCGTTCGGAGAATGGTTCTCCGAGCAGCACGGCGGC
GAGCGAACTGCGTGCATGGTAGGTATTCGCAGCGATGAAAGTCTCAACCGGTTTCGCACCATTGTGAACGAGAGAAAGAC
CCGGTGGGAGGATTTCGGCTGGACGACGCTGGTCACCCCCAATGTCTATAACGCCTACCCGATCTATGACTGGAAGACGG
ATGATGTTTGGACGGCCAACGGCAAGTTTGGCTGGGACTACAACAAAGTCTATGACCTGATGCACCTGGCCGGGCTGTCT
CTGCACGATATGCGCCTCTGCCAGCCATTTGGGGACGACCAGCGGCAGGGACTGTGGCTATTCAAAATTCTGGAGCCAGA
CGTGTGGGCCAAATTGGTGAATCGCGTGGCCGGAGCCAATTTCGGGCAACGCCACGTGCAGGAGATGGGCAATGTGATGG
GCAATATCCGCATTCAGCTACCCGAGGGGTATACCTGGAAGCGGTACGCCAAGTTCTTGCTGGCGACCATGCCGCCCTAC
CTGGCTGAGCATTACCGTAAAAAGATCGCCAAGTTCCTCAAGGTCTGGCGTAAGGATATCCGCAGCGGCAAGTATCCCGT
GGATCGCATCTATGATTTTGCCGATCCCAAGATGGAAGCAGCCAGAAAGGTCCCAAGCTGGCGGCGGGTCTGCAAAGTAA
TTCTCAAGAATGACTACTGGTGCAAGGGGTTGTCGTTCTCCCAAACTACCCGGGAGATGGACCGGCAACTGGCGCTGATC
ACCAAGTACATGGACTTGTGA

Protein sequence :
MSKTYLPVDVYTAARQRMERVFDDFPSVYLSFSAGKDSGVMLNLALEVAREKDCLPLNVLILDLEAQYQHTADYIQRVAD
NPDVNLHWVCLPLHLRNAVSQIQPHWMCWDPDAKDLWVRDLPDHPKVISDENYFPFFKRGMEFEEFVPAFGEWFSEQHGG
ERTACMVGIRSDESLNRFRTIVNERKTRWEDFGWTTLVTPNVYNAYPIYDWKTDDVWTANGKFGWDYNKVYDLMHLAGLS
LHDMRLCQPFGDDQRQGLWLFKILEPDVWAKLVNRVAGANFGQRHVQEMGNVMGNIRIQLPEGYTWKRYAKFLLATMPPY
LAEHYRKKIAKFLKVWRKDIRSGKYPVDRIYDFADPKMEAARKVPSWRRVCKVILKNDYWCKGLSFSQTTREMDRQLALI
TKYMDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-75 46
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-75 46
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 5e-75 46
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 5e-75 46
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-75 46
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-75 46
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 2e-74 45
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 1e-74 45
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 4e-75 45
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 3e-75 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acife_1995 YP_004784441.1 phosphoadenosine phosphosulfate reductase VFG1504 Protein 8e-76 46