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Name : Acife_1805 (Acife_1805) Accession : YP_004784260.1 Strain : Acidithiobacillus ferrivorans SS3 Genome accession: NC_015942 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1789581 - 1791464 bp Length : 1884 bp Strand : - Note : TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: afr:AFE_0948 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC DNA sequence : ATGGCTACCCGCCCCACAGATGTTGTGAACACCATGCAGGACGCCGTGGTAACCTGCGGCCCGATTCCCGGCTCACACAA GCGTTATCTCGCCGGGGAGATGTTCCCGGAATTGCGTGTCCCCCTGCGAGAGATCCAGCAGAGCGATTCGCGGAAACGGG ACGGCAGCCTCGAAAGCAATCCTTCTATCCCGGTCTATGATTGCAGCGGTCCCTACACCGACCCGGACGCGATCATCGAT ATTCATGCGGGCTTGCCTGCCCTGCGCTGGCAGTGGTCGCAGCCAGATACGGCCATTGCCAGCCGTCCCGAGCCCAGTTC CGCCTATGGCCGTGCCCGTCTGGCGGATGTCCGCACGGCCGATCTGCGTTTCAATCATCGCCGCGAAATCCGCCGGGCGG CCAATGGCGGCAACGTCTCCCAGATGCACTATGCGCGGCATGGCATCATCACCCCCGAGATGGAGTTCGTCGCCATCCGC GAAAACCAGGGTCTGGAGCGTCTGCGCGCCAGCCATCCGGCGCTGTTCCGCGCCCATCGTGGTGAGTCCTTCGGCGCGCA GATCCCCGACACCATTACCCCGGAATTTGTGCGTGACGAAATTGCCCGGGGCCGCGCCATCATTCCCGCCAATATCAACC ATCCGGAGTTGGAGCCGATGATTATCGGCCGCAATTTTCTGGTGAAGATCAATGCCAATATCGGCAACTCTGCAGTCAGC TCGTCCATCGCTGAAGAAGTAGAAAAAATGGTCTGGTCGATCCGCTGGGGTGCCGATACGGTCATGGATTTGTCCACCGG CAAGCATATTCACGAAACCCGCGAATGGATTATCCGCAATAGCCCCGTGCCCATCGGTACCGTGCCGATTTATCAGGCTT TGGAAAAGGTGGACGGTAAGGCCGAAGACCTCACCTGGGATCTCTATCGTGACACCCTCATCGAACAGGCGGAGCAGGGA GTGGATTACTTCACCATCCATGCCGGTGTCCTGCTGCGTTACGTCCCGCTGACCGCGCATCGCCTTACCGGTATCGTGTC GCGTGGTGGTTCCATCATGGCCAAATGGTGTCTCGCCCACCATCAGGAGAGCTTCCTCTATACCCATTTTGAAGAAATCT GCGAAATCATGAAGGTCTATGACGTGAGCTTCTCCCTTGGCGACGGGTTGCGTCCAGGTTCCCTGGCCGACGCCAATGAC GAGGCCCAGTTTGCCGAGCTGCATACCCTGGGGGAACTCACCCAGATTGCCTGGAAGCACGATGTGCAGGTCATGATCGA AGGCCCCGGCCATGTCCCCATGCAACTCATCAAGGCCAATATGGAGGAGGAGCTGCAGCACTGTTTCGAGGCCCCGTTCT ACACCCTTGGACCGCTGACCACGGACATTGCCCCTGGCTATGACCATATTACCAGCGCCATCGGCGCCGCCCAGATCGGT TGGTATGGCACGGCCATGCTCTGCTACGTCACGCCCAAAGAACATTTGGGCCTGCCGGACAAAAACGATGTGCGGGAGGG GGCGATTACCTACAAGATTGCCGCCCATGCCGCCGACCTGGCCAAGGGGCATCCCGGTGCGCAGGTGCGCGACAATGCCC TGTCCAAGGCGCGTTTTGAATTTCGCTGGGAGGACCAGTTTCACCTCGGGCTGGATCCGGAAAAGGCGCGGGAATATCAC GACGAGACCCTCCCGCAGGAAGGCGCCAAGGCGGCCCATTTCTGCTCTATGTGCGGTCCGCATTTCTGTTCCATGAAAAT CTCTCAGGATTTGCAGGAGTATGCCCAGTCTAAAGGCGAAGATATTGAGACCGCGCGCTTAGAAGGTATGCAGGAAAAGG CTGAGGATTTCAAACGGCTGGGGAAAAATATCTATCTACGTTAA Protein sequence : MATRPTDVVNTMQDAVVTCGPIPGSHKRYLAGEMFPELRVPLREIQQSDSRKRDGSLESNPSIPVYDCSGPYTDPDAIID IHAGLPALRWQWSQPDTAIASRPEPSSAYGRARLADVRTADLRFNHRREIRRAANGGNVSQMHYARHGIITPEMEFVAIR ENQGLERLRASHPALFRAHRGESFGAQIPDTITPEFVRDEIARGRAIIPANINHPELEPMIIGRNFLVKINANIGNSAVS SSIAEEVEKMVWSIRWGADTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGKAEDLTWDLYRDTLIEQAEQG VDYFTIHAGVLLRYVPLTAHRLTGIVSRGGSIMAKWCLAHHQESFLYTHFEEICEIMKVYDVSFSLGDGLRPGSLADAND EAQFAELHTLGELTQIAWKHDVQVMIEGPGHVPMQLIKANMEEELQHCFEAPFYTLGPLTTDIAPGYDHITSAIGAAQIG WYGTAMLCYVTPKEHLGLPDKNDVREGAITYKIAAHAADLAKGHPGAQVRDNALSKARFEFRWEDQFHLGLDPEKAREYH DETLPQEGAKAAHFCSMCGPHFCSMKISQDLQEYAQSKGEDIETARLEGMQEKAEDFKRLGKNIYLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 70 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 70 |
