Gene Information

Name : Pyrfu_0414 (Pyrfu_0414)
Accession : YP_004780537.1
Strain : Pyrolobus fumarii 1A
Genome accession: NC_015931
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 387006 - 387755 bp
Length : 750 bp
Strand : +
Note : PFAM: ABC transporter; KEGG: hbu:Hbut_1473 hypothetical protein; SPTR: Putative uncharacterized protein

DNA sequence : 
ATGCCGCGCGAAGTCATACGCCTAGAGAACGTCGTGAAGATCTACGGGTCGGGCGCCACCTGCACCATAGGCCTACGCGG
CGTCACACTCACCATACACGAGGGCGACTTCATAGCAGTCATGGGGCCCAGCGGCTCCGGCAAAACAACACTCCTCAACA
TAATGGGGCTCCTCGACAAGCCCACAAGCGGCAAGGTCTACATAGGCGGCGTGGAGGCCTCGAGGCTGGGCAGCAGGCAG
CTAGCCAGGCTAAGAAACCGCTTCATAGGCTTCGTGTTCCAACACTTCAACCTCATACCCAGGCTCACCGTCCAGGAGAA
CATCGAGCTGCCGCTGGTCGCGAGGGGAGTCCCCCGCAGAGAGAGAGCCGAGAGGGCAAAGAGAGCACTCATAGCCGCGG
GTGGAGACCCCTCCTGGCTACCAAAGAAGCCCAACCAGCTATCCGGAGGCCAGCAGCAGAGAGTAGCGATAGCAAGGGCG
CTGGTCGGAGAGCCCCGGGTCATACTCGCAGACGAGCCAACCGGTAACCTAGACCGCGCCTCAGCCGCCACGGTAATGAG
GACATTCCTCACCCTAAACCAGCAAGGCCAGACCATAGTCATGGTGACGCACGACCCGGAGGTAGCAAACTGCGCCAAGA
AGATCCTCATAATACGCGACGGGATGATAGTAGACACCCTCGACCCAGACCCAAACACCTGCATCGCACACAAGAAGATA
GAGACGAGAGACCTAGCAAGAAGAGGGTAG

Protein sequence : 
MPREVIRLENVVKIYGSGATCTIGLRGVTLTIHEGDFIAVMGPSGSGKTTLLNIMGLLDKPTSGKVYIGGVEASRLGSRQ
LARLRNRFIGFVFQHFNLIPRLTVQENIELPLVARGVPRRERAERAKRALIAAGGDPSWLPKKPNQLSGGQQQRVAIARA
LVGEPRVILADEPTGNLDRASAATVMRTFLTLNQQGQTIVMVTHDPEVANCAKKILIIRDGMIVDTLDPDPNTCIAHKKI
ETRDLARRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pyrfu_0414 YP_004780537.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-48 48
Pyrfu_0414 YP_004780537.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-35 46
Pyrfu_0414 YP_004780537.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-36 46
Pyrfu_0414 YP_004780537.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-35 42