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Name : LCGT_0973 (LCGT_0973) Accession : YP_004779150.1 Strain : Lactococcus garvieae ATCC 49156 Genome accession: NC_015930 Putative virulence/resistance : Unknown Product : glycine betaine ABC transporter permease/substrate-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4176 EC number : - Position : 1001608 - 1003332 bp Length : 1725 bp Strand : - Note : - DNA sequence : ATGATTGAGTTAGCAATAGGTAAGATACCCTTAGCAGATTGGGTTTCGACTGCAACAGATTGGATTACAAGTAATTTAAG TGCTGGTTTTGATATTATTCAAAAATCCGGTACAGCAATTATGGATACAGTAACTGCAGGACTTACAGCTGTACCCTTTT GGTTAATGATTATTGTGGTTACATTCTTGGCAGTTTTAGTTTCAGGACGTAAAATTGCCTTCCCTATCTTTACATTCTTA GGTTTAGTTCTTATTGCCAATCAAGGTTTATGGACAGACTTGATGAATACAGTAACATTGGTCTTGCTCTCTAGTTTAGT TTCTATTATTATCGGTATTCCTTTAGGTATATGGATGGCTAAGTCCGAACTTGTTGCTAAGATTGTACAACCAATATTGG ACTTCATGCAAACCATGCCCGGTTTCGTTTACTTGATTCCGGCCGTTGCTTTCTTTGGTATCGGTGTGGTTCCTGGTGTA TTTGCCTCTGTTATCTTTGCTTTGCCTCCAACAGTTCGTATGACAAACTTGGGTATTCGTCAAGTTTCAACTGAATTGGT CGAAGCAGCAGATTCTTTTGGTTCAACACCAAGACAAAAGCTCTTTAAGTTAGAGTTTCCTTTGGCAAAAGGAACAATTT TAGCAGGTGTTAACCAAACAATTATGTTGGCACTCTCAATGGTTGTTATTGCTTCAATGATCGGTGCACCTGGACTTGGA CGCGGTGTCTTAGCGGCTGTTCAATCTGCGGATATCGGTAAAGGTTTTGTAAACGGTATTGCTTTGGTTATTTTAGCTAT TATCATTGACCGTTTCACTCAAAAACTTAACGTTGCCCCAACTGAAAAGCAAGGCAATCCACAGCTTAAAAAATGGAAGA AAAGAGGAGCGCTGGTAGCTCTTATCGTTCTGATCATTGGTGGAATTTCTGGTGTTACACTTAAGAAAACAGCAGCAGAT AAAAATGTTGAGCTTGTCTATATGAACTGGGATTCAGAAGTTGCATCTATTAACGTATTGAGTCAAGCTATGGAGCAACA TGGGTTTGATGTTAAGAAGACAGCTTTAGATAATACAGTTGCTTGGCAAACTGTAGCGAACGGTCAAGCTGACGGTATGG TTTCTGCTTGGCTGCCAAACACCCATGAAACACAATGGAAAAAATTCAGCAAATCTGTTGAATTGCTTGGCCCTAACCTT AAAGGAGCTAAAGTTGGTCTTGTTGTTCCAAGCTACATGAAAGCAAACTCTATTGAAGACCTTAAAGACCAAGCGGATAA ATCTATTATCGGTATTGAACCTGGTGCTGGTGTTATGGCCGCAACAGAAAAAGCCCTGAAAGATTATGATAACTTGAAAG ATTGGAACTTGGTACCATCGTCTTCAGGTGCGATGACTGTTGCCCTTGGTGAAGCTATCAAACAACATAAAGATATCGTA ATCACAGGTTGGTCACCACACTGGATGTTTAATAAATATGATTTGAAATATTTAGAAGATCCTAAAAACTCAATGGGTAA AGCTGAAGACATCAACACTATTGTACGTAAAGGACTTAAAGAAGATAATCCTGAAGCTTATAAAGTATTAGACAAGTTTA ACTGGTCTCAAAAAGATATGGAATCTGTAATGCTTGATGTTCAAAATGGTAAAACACCAGAACAAGCAGCAGCAACATGG ATTAAATCTCATAAAGAACAAGTTGATAAATGGTTTGAAGACTAA Protein sequence : MIELAIGKIPLADWVSTATDWITSNLSAGFDIIQKSGTAIMDTVTAGLTAVPFWLMIIVVTFLAVLVSGRKIAFPIFTFL GLVLIANQGLWTDLMNTVTLVLLSSLVSIIIGIPLGIWMAKSELVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGV FASVIFALPPTVRMTNLGIRQVSTELVEAADSFGSTPRQKLFKLEFPLAKGTILAGVNQTIMLALSMVVIASMIGAPGLG RGVLAAVQSADIGKGFVNGIALVILAIIIDRFTQKLNVAPTEKQGNPQLKKWKKRGALVALIVLIIGGISGVTLKKTAAD KNVELVYMNWDSEVASINVLSQAMEQHGFDVKKTALDNTVAWQTVANGQADGMVSAWLPNTHETQWKKFSKSVELLGPNL KGAKVGLVVPSYMKANSIEDLKDQADKSIIGIEPGAGVMAATEKALKDYDNLKDWNLVPSSSGAMTVALGEAIKQHKDIV ITGWSPHWMFNKYDLKYLEDPKNSMGKAEDINTIVRKGLKEDNPEAYKVLDKFNWSQKDMESVMLDVQNGKTPEQAAATW IKSHKEQVDKWFED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuABC | YP_281522.1 | glycine betaine-binding protein/glycine betaine transporter permease | Not tested | Not named | Protein | 5e-146 | 59 |
