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Name : LCGT_0062 (LCGT_0062) Accession : YP_004778239.1 Strain : Lactococcus garvieae ATCC 49156 Genome accession: NC_015930 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 71404 - 73977 bp Length : 2574 bp Strand : + Note : - DNA sequence : ATGGCAAATATTATTAAAAAATTAGTAGAAAACGACAAAAAAGAGCTCAAAAGATTGCATAAAATGGCTCAAAAAGTCGA AGCATATGAAGAAGAAATGGCTGCCCTTGCCGATGAGCAACTACAAGCCAAAACAGAAGAATTTAGAGAACGTGCAGCGG CAGGTGAGAGTCTTGACGACATGCTGTACGAAGTTTTTGCTGTCTGCCGTGAAGCAGCAAAACGTGTCCTTGGTCTTTTT CCTTTCCACGTGCAAATTATGGGGGGGATTGTCCTCCACAATGGTGACGTTCCGGAGATGCGTACTGGTGAAGGTAAAAC TTTGACAGCTACCATGCCCGTTTATTTAAATGCGATTTCTGGCAAAGGTGTACACGTAGTAACCGTCAATGAGTACTTGA CAACACGTGACGCAACCGAAATGGGTGAATTATACAACTGGCTCGGTTTGACTGTTGGACTTAACCTTAACTCGAAGTCA CCAGAAGAAAAACGTGAAGCATACAACTGTGACATCACTTATTCGACATCATCTGAGCTTGGTTTCGACTATTTGCGTGA CAACATGGTGACTCGTTTTGAAGATATGGTACAGCGTCCGCTTAACTATGCGCTTGTCGATGAGGTCGATTCAATCTTGA TTGATGAGGCGCGTACACCGTTGATTATTTCAGGTCAAGCAGAAGGCTCTTCTGCGCTTTATTACCGTGCAGATCAGTTT GCTAAAACTTTGGTTGGCCGTGAAGATTATGAAGAAGGCGATGACTATAAGATTGACTTGCAATCTAAAACTATTTCACT CACAGATGAGGGAATAGATAAAGCAGAACGTTTCTTTGATATTGAAAATCTTTATGACATGGAAAATGTTGCCTTGACTC ACTTTTTGGACAATGCACTCCGTGCCAACTATATCATGCTTCATGATATTGATTATATGGTTGATGACCAACAGGAAGTC TTGATTATTGACCAGTTTACAGGTCGTACAATGCCTGGTCGTCGCTATTCTGATGGTTTACACCAAGCGATTGAAGCCAA AGAAGGTGTGCCGATTCAAGATGAATCGAAAACAATGGCTTCAATTACGATTCAAAACTACTTCCGTATGTACAAAAAAT TGTCAGGGATGACGGGTACAGCGAAAACGGAAGAAGAAGAATTCCGTGAAATCTATAATATTCAAATTATCCCAATCCCA ACGAACCGTCCAATCCGCCGTGTGGACCATCCAGATTTGCTTTATCCAACACTTGAAGCAAAACTGAATGCCGTCTTGGA TGACGTGAAGAAACGTCATGCTGAAGGACAACCTATCTTGATTGGTACTGTGGCTGTTGAAACTTCTGAGATCATTTCGA AAAAATTGGTTGAAGCTAAAATTCCGCATGAAGTTTTGAATGCGAAAAACCACTTCCGCGAAGCACAAATCATTATGAAT GCCGGTCAACAAGGCGCAGTAACCATTGCGACCAATATGGCGGGTCGTGGTACCGACATTAAGCTTGGCCCTGGTGTTAA AGAACATCCAAATCCAGAATACCAAGGTCTCGCGGTAATCGGTACGGAACGTCATGAAAGTCGTCGTATCGATAACCAGC TCCGTGGACGCTCTGGGCGTCAAGGGGACGCTGGTGTCTCTCAATTTTATCTTTCACTTGAAGATGACTTGATGAAACGT TTTGGTTCTGAACGTGTTTCTGCCTTCCTTGATCGTATGCGTATCAGTGGTGATGATGCTGTCATCAAATCGGGCTTGAT CACACGACAAATCGAAGGCTCACAGAAACGTGTCGAAGGAAATAACTACGATTCACGTAAACAAGTCTTGCAATATGATG ATGTGATTCGTGAACAACGTGAAGTTATTTATGCACAACGCCATGAAGTGATTGTAGCGACTGAAGATATGACACCTGCT CTGTACGGTATGTTTAAGCGTACAATTGATCGCCAAGTTGACGGTCACGCAGCAACAGGTGATCTTCAGGAAGAAGCAAA TCTGCTCAATCTTTATGAAACTGTTGAAAACACAATGCTTTCAGCGGATGTCTTTAGCATTGAAGAGCTTCGTGGTAAAA GCCCACAAGAAATTAAAGATTTTCTTTTTGAAAAAGTTAAAGAACATTATGCAACACAAATGGAACGCTTGGGTGATGAA GAGCGTCAGATTGACTTCCAACGTGCTGTTATCCTTCGTGTAGTAGACAACAATTGGTCTGAGCATATCGATCATCTGGA TCAAATGCGTCAGTCTGTAGGCTTACGTGGGTATGCACAAAATAATCCGATAGTTGAATACCAAGAAGAATCACACAAAA TGTTTAATAACATGATTGGAGCTATTGAGTTTGAAGTGACGCGTTTGATGATGAAAGCTCAGATTCATCCGCAAACCGCA GTTCAAGAACAAGCGCCGCGTGTAACTGTAACGGCTTCACAAGAAAACTTGACAAATGTGGGGCAATCTTCTGCAGAAGG TATTGATTTCAGTAAAGTTGGCCGTAATGACATGTGTCCATGTGGTTCAGGTAAAAAATATAAGAACTGTCATGGCCGCG TTCACACCGCTTAG Protein sequence : MANIIKKLVENDKKELKRLHKMAQKVEAYEEEMAALADEQLQAKTEEFRERAAAGESLDDMLYEVFAVCREAAKRVLGLF PFHVQIMGGIVLHNGDVPEMRTGEGKTLTATMPVYLNAISGKGVHVVTVNEYLTTRDATEMGELYNWLGLTVGLNLNSKS PEEKREAYNCDITYSTSSELGFDYLRDNMVTRFEDMVQRPLNYALVDEVDSILIDEARTPLIISGQAEGSSALYYRADQF AKTLVGREDYEEGDDYKIDLQSKTISLTDEGIDKAERFFDIENLYDMENVALTHFLDNALRANYIMLHDIDYMVDDQQEV LIIDQFTGRTMPGRRYSDGLHQAIEAKEGVPIQDESKTMASITIQNYFRMYKKLSGMTGTAKTEEEEFREIYNIQIIPIP TNRPIRRVDHPDLLYPTLEAKLNAVLDDVKKRHAEGQPILIGTVAVETSEIISKKLVEAKIPHEVLNAKNHFREAQIIMN AGQQGAVTIATNMAGRGTDIKLGPGVKEHPNPEYQGLAVIGTERHESRRIDNQLRGRSGRQGDAGVSQFYLSLEDDLMKR FGSERVSAFLDRMRISGDDAVIKSGLITRQIEGSQKRVEGNNYDSRKQVLQYDDVIREQREVIYAQRHEVIVATEDMTPA LYGMFKRTIDRQVDGHAATGDLQEEANLLNLYETVENTMLSADVFSIEELRGKSPQEIKDFLFEKVKEHYATQMERLGDE ERQIDFQRAVILRVVDNNWSEHIDHLDQMRQSVGLRGYAQNNPIVEYQEESHKMFNNMIGAIEFEVTRLMMKAQIHPQTA VQEQAPRVTVTASQENLTNVGQSSAEGIDFSKVGRNDMCPCGSGKKYKNCHGRVHTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 1e-134 | 41 |
