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Name : LCGT_0482 (LCGT_0482) Accession : YP_004778659.1 Strain : Lactococcus garvieae ATCC 49156 Genome accession: NC_015930 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 499112 - 500383 bp Length : 1272 bp Strand : - Note : - DNA sequence : ATGCTTGATATCAAAAAAATCCGTGCAGACTTTGACGGAGTAGCCGCAAAATTGGAAACACGTGGTGTTAAAAAAGAAAC ACTGCAAGAACTCCATGAACTCGATGTACGTCGTCGTGAACTGATCGTACAATCTGAGAACTTGAAAAAAGAACGTAATG CCGTATCTGATGAAATCGCGTTGATTAAACGTGAAAAAGGTGATGCATCTGAAAAAATCACTGCCATGAAACAAGTTTCT GCCGATATAAAAGTCATTGATGCTGAGCTTGCAGATATCGAAGAAAAGTTGACTACATACACAACAACGCTCCCTAACTT GCCACATGACGATGTGCCTGTAGGTGCTGATGAGGAGGATAATGTCGAAATTCGTCGTCATGGCCAAGCGCCTGAGTTCA GCTTTGAGCCTAAGCCTCATTGGGACTTAGGAGAGTCTCTTGGCATACTTGATTGGGAACGTGGCGGTAAAGTTACAGGT TCTCGTTTCCTCTTCTATAAAGGCGCTGGGGCGCGTTTAGAGCGTGCCTTGTATAACTTTATGTTAGACGAACATGCTAA AGAAGGCTATACTGAAATGATTACACCTTATATGGTCAATCAAGAGTCTATGTTCGGTACAGGTCAATATCCAAAATTCA AAGAAGATACTTTTGAAGTAAATGATGACCGCGGTTTTGTACTCATTCCTACTGCTGAAGTACCTTTGACCAACTACTAC CGTGGTGAAATCTTGGATAATGCTGAACTTCCGGTTTACTTCACAGCAATGTCTCCTTCATTCCGTTCTGAAGCTGGTTC AGCTGGACGTGATACACGTGGCTTGATTCGTTTGCACCAGTTCCATAAAGTTGAAATGGTCAAATTTGCTCGCCCTGAGG AATCTTACGATGAACTAGAAAAAATGGTTGTCAATGCCGAAAATATTCTCCAAAAACTCGGTTTAGCTTATCGTGTCATC GCACTTTCTACAGGCGATATGGGCTTCTCTGCTGCTAAAACTTATGACTTGGAAGTTTGGATCCCGGCCCAAAACACTTA CCGTGAAATTTCAAGTTGTTCAAACTGTGAAGACTTCCAAGCACGCCGTGCCCAAATCCGCTATCGTGATGAAGACGGCA AAGTTAACCTGCTTCACACTTTAAATGGTTCTGGTCTTGCTGTTGGTCGTACAGTTGCTGCCATCCTTGAAAACTATCAA AACGAAGACGGATCAGTAACTGTCCCTGAAGTCCTTCGTCCATATATGGGTGGTTTAGAAGTTATTAAATAA Protein sequence : MLDIKKIRADFDGVAAKLETRGVKKETLQELHELDVRRRELIVQSENLKKERNAVSDEIALIKREKGDASEKITAMKQVS ADIKVIDAELADIEEKLTTYTTTLPNLPHDDVPVGADEEDNVEIRRHGQAPEFSFEPKPHWDLGESLGILDWERGGKVTG SRFLFYKGAGARLERALYNFMLDEHAKEGYTEMITPYMVNQESMFGTGQYPKFKEDTFEVNDDRGFVLIPTAEVPLTNYY RGEILDNAELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFARPEESYDELEKMVVNAENILQKLGLAYRVI ALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAQIRYRDEDGKVNLLHTLNGSGLAVGRTVAAILENYQ NEDGSVTVPEVLRPYMGGLEVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-166 | 80 |
