Gene Information

Name : LCGT_1798 (LCGT_1798)
Accession : YP_004779975.1
Strain : Lactococcus garvieae ATCC 49156
Genome accession: NC_015930
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1772570 - 1773214 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAAAAACGAAATAGTCTCTCTATCTAATATCCAAAAAAAAATACAGGATAAACCCATTTTTTCAATCCATGCGTT
TACTGTAAGTAAGGGTGATTTTGTTACGATCAAAGGTGTGAGCGGCTCTGGAAAGTCGACGCTGTTAAACATACTGGGGA
TGAACGATACGGTAAGTTCAGGAGAATATTTATTTGAGGGTGTTGAAACGGCAGAGCTGAAAGCAAAAGAAAAACTAAAA
ATAAAGAGAAATAAAATATCTTTTTTATTTCAAGATTTCGGCCTGGTTGAAGAAGAAACAATTAATTTTAATTTAGAAAT
AGGCTTAAAATATAGCAAATTAAGTAGGAAAGAGAAAGTAAAACAAAAAAAGGAAGCACTGAATGCGGTCAATTTAAATA
AAAAACTATCGACAACCATTAGCAGTTTATCTGGAGGTGAAAAACAGCGCGTTGCACTCGCGCGAATTATTTTAAAACCC
TCCATACTTATCTTAGCAGATGAGCCTACAGGTTCTTTAGATTCACTCAACAGAGACATCGTTACGGATATTTTATTTAA
ACAATCAATAGATGGGAAAGCAGTAATCATTGTCACCCATGATGAGGAACTTGCAAAGAAAGGAAATAAAACCATAGAGC
TTTAA

Protein sequence : 
MNKNEIVSLSNIQKKIQDKPIFSIHAFTVSKGDFVTIKGVSGSGKSTLLNILGMNDTVSSGEYLFEGVETAELKAKEKLK
IKRNKISFLFQDFGLVEEETINFNLEIGLKYSKLSRKEKVKQKKEALNAVNLNKKLSTTISSLSGGEKQRVALARIILKP
SILILADEPTGSLDSLNRDIVTDILFKQSIDGKAVIIVTHDEELAKKGNKTIEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-41 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGT_1798 YP_004779975.1 ABC transporter ATP-binding protein CP003583.1.gene613.p Protein 3e-41 58
LCGT_1798 YP_004779975.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-34 49
LCGT_1798 YP_004779975.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-24 42