Gene Information

Name : LCGT_1717 (LCGT_1717)
Accession : YP_004779894.1
Strain : Lactococcus garvieae ATCC 49156
Genome accession: NC_015930
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1698420 - 1699049 bp
Length : 630 bp
Strand : -
Note : -

DNA sequence : 
ATGATAGAACTACAAGAAGTGACCAAAAAATTTGGTAAACATCAGATTTTCGATCGCTATTCCTTAACTATTTCAGCTGA
GAAAATGACAGCTATCTTAGGAAGAAGCGGAGCTGGAAAGTCAACTCTACTTAATCTTATTGGACTAATCGAAGAAGCGG
ATTCGGGACAGGTCTACATAGCGGGGAAAAAAGCACCACAGATAAACAGTAAGGAGGCACTGCTTATGCGACGCAATTTT
ATTTCCTTCCTTTTTCAAAACTTTGCCTTGATTGAAGATGAGAGCATTGAGCGAAATCTAAACATTTCTCTTGTTTATGA
AAAAATAAAAGGGACAGAAAAGCGCCGTAGGATGAGAGAAGTTTTAAATCAAGTTGGTATCCCTCATCACTTGAATGAAA
AGGTATATGCATTATCAGGTGGAGAAAAACAGCGTGTAGCTCTTGCGCGTGCTTTACTGAAGCGCAGTCAAATCCTCTTG
GCTGATGAGCCGACAGGATCTTTAGATGAGCAAAATAGAGTCTTGATACTGGGATTATTACGCCAAGAAGTAGAAAAAGG
AAAAACAGTGATCATTGTAACGCATGATCCTGCTGTTGTTGCGGCATGTGATGAATACATTGAAATATAG

Protein sequence : 
MIELQEVTKKFGKHQIFDRYSLTISAEKMTAILGRSGAGKSTLLNLIGLIEEADSGQVYIAGKKAPQINSKEALLMRRNF
ISFLFQNFALIEDESIERNLNISLVYEKIKGTEKRRRMREVLNQVGIPHHLNEKVYALSGGEKQRVALARALLKRSQILL
ADEPTGSLDEQNRVLILGLLRQEVEKGKTVIIVTHDPAVVAACDEYIEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-39 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGT_1717 YP_004779894.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 7e-38 50
LCGT_1717 YP_004779894.1 ABC transporter ATP-binding protein CP003583.1.gene613.p Protein 5e-36 49