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Name : LCGT_1589 (LCGT_1589) Accession : YP_004779766.1 Strain : Lactococcus garvieae ATCC 49156 Genome accession: NC_015930 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1558362 - 1560608 bp Length : 2247 bp Strand : - Note : - DNA sequence : ATGCTCTGCCAAAATTGTAAAATAAACGAAGCGACAATTCACCTTTATACAAATGTGAATGGCCAGCGTAAGCAAGTGGA TCTATGCCAAAACTGTTATCAAATTATGAAATCAGGTGGTCAAGAAAGCTTGTTTGCTGGAGCTACAAATATTTCGAATA ATGACGATCCTTTTAATCCGTTCCCAGATATTTTCCAAGCTTTACATGGAAATGATCAAGGTCGGACAATGACCCCTCCA ACACAAGCTGGAGGTCGAGGCCCAGGAGGCCCACAAAATCCTCGTGGAGGCCAAGCACCTAAAGGACTTCTCGAAGAATT CGGGGTCAACATCACTGATGCTGCACGTCGTGGGGAAATCGATCCTGTTATTGGGCGTGATTCTGAAATTACGCGTGTCA TCGAAATTCTGAATCGTCGGACAAAAAATAATCCTGTTCTTATCGGAGAACCTGGTGTTGGTAAAACAGCAGTTGTTGAA GGATTATCCCAAAAAATTGTTGACGGTGACGTACCACAAAAATTACAAAATAAAGAAGTTATTCGTCTGGACGTTGTCAG TCTCGTCCAAGGTACTGGTGTGCGTGGACAATTTGAAGAGCGCATGCAAAAACTGATGGAAGAGATCCGTAAACGTGATG ATGTTATCCTCTTCATTGATGAAATTCATGAGATTGTGGGCGCAGGTTCTGCTGGGGAAGGAAATATGGATGCCGGAAAT ATTCTTAAACCGGCTTTAGCACGTGCCGAACTCCAACTTGTTGGAGCAACAACACTCAATGAATATCGAATTATTGAAAA GGATGCAGCGCTTGAGCGTCGGATGCAACCTGTTAAAGTTGATGAACCTTCTGTAGATGAGACAATCACAATCTTACGTG GTATTCAAAAACGTTATGAAGATTATCATCATGTAAAATACTCCGATGAAGCAATCTTAGCTGCTGCAAATCTATCGAAC CGTTATATTCAAGACCGTTTCCTTCCAGATAAGGCAATTGACTTGCTGGACGAAGCAGGTTCGAAAAAGAATCTCACCCT CAAATTTGTTGATCCAGAGGACATAAAGAAACGCATTGAGCAAGCAGAAGTGCAAAAAAATGAAGCTATGCAACGTGAAG ATTTTGAGAAAGCAGCCCATTTCCGTGATCAAATCGCTAAGCTTCGTGAGCTGCAAAGTCATGAAATCTCGGATACTGAT ATGCCAAATATCACAGAAAAAGATATCGAAGCAATCGTTGAAGAAAAAACGCATATCCCTGTGGGAGATTTGAAAGAAAA AGAACAAACACAGCTGATTAATCTGGCCGAAGACTTGAAAGAACATGTTATCGGACAAGATGAAGCAATTGATAAAATTT CGAAAGCCGTGCGTCGTTCACGTGTTGGACTTGGAAAGCCTAATCGTCCTATCGGTTCATTCCTCTTTGTTGGACCGACT GGTGTAGGGAAGACCGAACTCGCGAAACAATTGGCTTATGAACTCTTTGGTTCTAGGGATAGCATGATTCGTTTTGACAT GTCGGAATACATGGAAAAACATAGTGTGGCTAAGTTGATTGGAGCTCCTCCAGGATATGTAGGTTATGAAGAAGCTGGTC AATTGACAGAACGTGTACGTCGTAACCCATACAGCTTAATCTTGTTGGATGAGATTGAGAAAGCCCACCCTGATGTTATG CATATGTTCTTGCAAATTCTTGATGATGGACGTTTGACAGATGCGCAAGGGCGTACAGTTTCCTTCAAAGATGCCATCAT CATTATGACATCGAATGCTGGTACAGGTAAGGTTGAAGCAAGTGTTGGTTTTGGTGCTGCACGTGAAGGACGTACAAATT CAGTACTTGGGGAATTGGGTAATTTCTTTAGTCCGGAATTCATGAATCGTTTTGATGCTATCATTGAATTCTCGGCATTG AGCAAAGAAAACTTGCTTAAGATTGTGGATTTAATGTTGGATGAAGTGAATGCTCAAATCGCTCAAAATGATATTCATCT TGATGTCACACAGGCCGTTAAAGAAAAACTTGTTGATCTGGGTTACGATCCGAAAATGGGGGCTCGTCCATTGCGTCGTA CCATCCAGGATAATATCGAGGATGCGATTGCTGATTTTTATATTGAGCATCCTGAATATAAAGAATTACTGGCAGACTTG GTCGATGATAAGATTGTTATTGTGAATAAGCCTGAAGAAGTAGAAGCCACAACGGATACATCTGATAATAAAGATGAGGA GAAATAA Protein sequence : MLCQNCKINEATIHLYTNVNGQRKQVDLCQNCYQIMKSGGQESLFAGATNISNNDDPFNPFPDIFQALHGNDQGRTMTPP TQAGGRGPGGPQNPRGGQAPKGLLEEFGVNITDAARRGEIDPVIGRDSEITRVIEILNRRTKNNPVLIGEPGVGKTAVVE GLSQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGVRGQFEERMQKLMEEIRKRDDVILFIDEIHEIVGAGSAGEGNMDAGN ILKPALARAELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVDETITILRGIQKRYEDYHHVKYSDEAILAAANLSN RYIQDRFLPDKAIDLLDEAGSKKNLTLKFVDPEDIKKRIEQAEVQKNEAMQREDFEKAAHFRDQIAKLRELQSHEISDTD MPNITEKDIEAIVEEKTHIPVGDLKEKEQTQLINLAEDLKEHVIGQDEAIDKISKAVRRSRVGLGKPNRPIGSFLFVGPT GVGKTELAKQLAYELFGSRDSMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPDVM HMFLQILDDGRLTDAQGRTVSFKDAIIIMTSNAGTGKVEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDAIIEFSAL SKENLLKIVDLMLDEVNAQIAQNDIHLDVTQAVKEKLVDLGYDPKMGARPLRRTIQDNIEDAIADFYIEHPEYKELLADL VDDKIVIVNKPEEVEATTDTSDNKDEEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-154 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LCGT_1589 | YP_004779766.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 59 |
| LCGT_1589 | YP_004779766.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 9e-159 | 54 |
